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scnpilot_p_inoc_scaffold_4_612

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(692546..693070)

Top 3 Functional Annotations

Value Algorithm Source
Endoribonuclease L-PSP n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L4M7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 172.0
  • Bit_score: 213
  • Evalue 1.70e-52
Endoribonuclease L-PSP {ECO:0000313|EMBL:EIZ79299.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 172.0
  • Bit_score: 213
  • Evalue 2.30e-52
endoribonuclease L-PSP similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 171.0
  • Bit_score: 180
  • Evalue 4.40e-43

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Taxonomy

Novosphingobium sp. Rr 2-17 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGCTGCGTAAAATGCTGAAAACCGCCGGCTGTGCCGCTCTGCTGCCGATCCTGATGGCGGCCGCTCCGGCCCAGGCGCAGGTGACTCGCATCAAGACCAACCCGTCCGCCTTCATTCTCGACGGCGTGCGCGTGGCGCCCGGCAATGAAATCTACTTCCTCTCGGGCCAGCTCGCCTCGCCCATCGACCCGGCCAAGGCCACCACGATGGAAGATTTCGGCGACACCAAGACCCAGACCGTCAGCGTGCTGAACAAGATCAAGAAGCAGCTCGAATCGCAGGGCTATTCGATCAAGGACGTGGTCAAGATGACGCTGTTCATCGCGGCCGATCCCAAGCTGGGCAAGATCGACTTTGCCGGGGCCAATGCCGGGTTCAAGGAATTCTTCGGCAGCGCGGAAAACCCCGACACCGTGGCCCGCTCGGCGTTTCAGGTGGCCAATCTGGTGGCCCCGCAATTCCTGATCGAGATCGAGGCGATTGCCGCCAAGAAGCCGGCCCCCGCCGCCAAGGCCAAGAAGTAA
PROTEIN sequence
Length: 175
MLRKMLKTAGCAALLPILMAAAPAQAQVTRIKTNPSAFILDGVRVAPGNEIYFLSGQLASPIDPAKATTMEDFGDTKTQTVSVLNKIKKQLESQGYSIKDVVKMTLFIAADPKLGKIDFAGANAGFKEFFGSAENPDTVARSAFQVANLVAPQFLIEIEAIAAKKPAPAAKAKK*