ggKbase home page

scnpilot_p_inoc_scaffold_59_212

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(210079..211008)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B35FD6 similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 308.0
  • Bit_score: 391
  • Evalue 7.90e-106
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB16365.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 305.0
  • Bit_score: 357
  • Evalue 1.80e-95
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 308.0
  • Bit_score: 345
  • Evalue 1.40e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium lindaniclasticum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGCCGCATTCGCTCCCCGATCTTGAAGCATGGGCCATCTTTGCCAAAGTGGCCGAATGCGGCAGTTTCAGCCGCGCGGGCGAGCAGTTGGGCCTTGCCAAGACGACCGTGTCCAAGGCCGTAACAAGGCTGGAACACAGGATGCGCGCCAGCCTCTTCCACCGCACCACGCGCAAATTGTCGCTGACCGAAACGGGCCGCCTTGCGCTGGAACGGGCAGCGCGCATTCTGATCGACGGCGCGGCAATCGAGGCCGATATTCTGGACGAAGCCGCCATCCCGCGCGGCCTTGTGCGCATCGCCACGATCAGCGCTTTGGGCGTTGAAGTGATCGCGCCGGTGCTGCCGGAGTTCCTCAAGGCCAATCCGGAGATCGAGGTCGATCTGGTGCTGACCGAAAACCGGGTCGATCTGGTGGCCGAAGGGTTCGATGCGGCCATTCAGGTGGGGCTCGATGGCGATTCCGCCAGCCTGCGCGCAGTTCGCCTGTCCTCGCTGCGCCGCCCGCTCGTGGGGGCGCCCGAATTGCTCGAGCGGCTGGGGACGCCCCAAACGCCGCATGATCTGGCCCGCTATCCCGCCGTCTTGCCCAGCCACATCGCCAACAGCCACGAATGGCAATTCGCCCGCGGCGACGAGGATCCTGTAACCGTGCGCGTCAATGGCCGCTATCGCGCCAACCATGCCGATGCGCTGGTGCCTGCGCTGGTGGCGGGGGTGGGCATCGGGCTGATGGCGGAATATTTCGTGTGGGATCATGTCCGCGCGGGCCGCCTGATCGAATTGCTGCCGGATTGGAGCACGCCGCCCGGCCCGCTCTATCTGATCACGCCGCCGGGCCGGGCGCGCCCCGCGCGGGTGCGCGCGCTGCTGGATTTTCTGCGCCCGCATCTGACCCTGCCGAAATGGGCCAATGGATACAAAGATTGA
PROTEIN sequence
Length: 310
MPHSLPDLEAWAIFAKVAECGSFSRAGEQLGLAKTTVSKAVTRLEHRMRASLFHRTTRKLSLTETGRLALERAARILIDGAAIEADILDEAAIPRGLVRIATISALGVEVIAPVLPEFLKANPEIEVDLVLTENRVDLVAEGFDAAIQVGLDGDSASLRAVRLSSLRRPLVGAPELLERLGTPQTPHDLARYPAVLPSHIANSHEWQFARGDEDPVTVRVNGRYRANHADALVPALVAGVGIGLMAEYFVWDHVRAGRLIELLPDWSTPPGPLYLITPPGRARPARVRALLDFLRPHLTLPKWANGYKD*