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scnpilot_p_inoc_scaffold_59_301

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(301859..302770)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZAP0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 301.0
  • Bit_score: 392
  • Evalue 3.50e-106
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EGD58323.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 67.1
  • Coverage: 301.0
  • Bit_score: 392
  • Evalue 4.90e-106
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 298.0
  • Bit_score: 297
  • Evalue 5.60e-78

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGCCCGCCTTCTCCCGTTTCCTGCGCTATTTCATGGTGGTGGGCCGTACCGGCTCCATTCGTAAGGCAGCCGATGAACTGCATGTCTCCGCCTCGGCCATCGACCGGCAAATCCTGAACGCCGAGGCCGAGATCGGTATGCCGCTGTTTGAGCGTCTGCCCTCGGGCCTGCGCCTGACGGCCGCGGGCGAGATCATGATGGCGGCGGGCGGCAACTGGCAAAAATCGCTGGCCGATGCGCGGGCGCGGATCGAGGATCTGCGCGGACTGAAACGCGGCCATGTCGAGATCGCCGTCATCCATGCGCTGACCAAGGGCTATATTCCCCAGGTATTGTCCGCGCTCCACCGGCGCTATCCGGGGATCACCGTGGCGCTGCGCATATTGGACAGCGCGGCGATGCGCGATGCGGTGGCCGATGGCGAGGTCGATTTCGGCATCGGCTTTGAACCGCAATCGATCCGCGACCTGACCGTGCGCGCCTTTGCCGATGTGCCGCTGGGCTTCATTACTCTGCCCGGCCACCCGATCGCGCAATTGCCCCGCGCGCGCTTTTCGATGGCCGCCGATCTGCCGGTCATCCTGCCCGCGCGGCCTCTGGCGGTGCATGATCAGGTGGCCGTTCTGCAAGGCGCGGCGCAGGTGCCGCTCAACCGCATCTTCACATCCGACAATATCCAGATGATCGCCAGTCTGGTGCAGGAAGGCGTCGGCGTGGGCGTCCTGTCATGGGTCGATGTGGCCAGCGAGGTGCGCGCCGGAACGCTCTGTTTTACCCCTCTGGCCGATCCGATCCTGAAACCTCTGGTGCTGGCCATGACCACGGCCACATCGCGCACGCTGTCCTATGCCGCCGATCTGGTGCTGGGCGAAATCCAGCAGGGGTTTGCCGCACTGGCCTATCAGAAATAG
PROTEIN sequence
Length: 304
MPAFSRFLRYFMVVGRTGSIRKAADELHVSASAIDRQILNAEAEIGMPLFERLPSGLRLTAAGEIMMAAGGNWQKSLADARARIEDLRGLKRGHVEIAVIHALTKGYIPQVLSALHRRYPGITVALRILDSAAMRDAVADGEVDFGIGFEPQSIRDLTVRAFADVPLGFITLPGHPIAQLPRARFSMAADLPVILPARPLAVHDQVAVLQGAAQVPLNRIFTSDNIQMIASLVQEGVGVGVLSWVDVASEVRAGTLCFTPLADPILKPLVLAMTTATSRTLSYAADLVLGEIQQGFAALAYQK*