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scnpilot_p_inoc_scaffold_80_101

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(121521..122132)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RS4_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 203.0
  • Bit_score: 392
  • Evalue 3.10e-106
  • rbh
rpsD; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 94.6
  • Coverage: 203.0
  • Bit_score: 392
  • Evalue 8.60e-107
30S ribosomal protein S4 {ECO:0000255|HAMAP-Rule:MF_01306}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 203.0
  • Bit_score: 392
  • Evalue 4.30e-106

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Taxonomy

Novosphingobium aromaticivorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGTCGAAGCGTCACGCCTCGAAGTACAAGATTGACCGCCGCCTTGGCGAAAACATCTGGGGCCGCCCCAAGTCGTCGGTGAACCGCCGTTCGTATGGCCCCGGTCAGCACGGTCAGCGCCGCAAGAGCAAGATCTCGGACTTCGGTATCCAGCTGCGCGCCAAGCAGAAGCTCAAGGGCTACTATGGCGACATCACCGAAAAGCAGTTCAAGCGCACCTATCAGGAAGCGTCGCGCATGAAGGGCGATACCGGTCAGAACCTGATCGGCCTGCTCGAACAGCGTCTGGACGCGGTGGTCTATCGCTCGAAGTTCGCCCCCACCATCTTCTCGGCCCGTCAGGTCGTTTCGCATGGTCACATCTATGTGAACGGCGTGAAGTGCAACATCGCCTCGCGTCGCGTTCGCCCCGGCGACGTGATCAGCCTCGGCAAGAAGGCCAAGGAAATGGCCCTCATCGCTGAAGCCCAGGCTCTGCCCGAGCGCGAAGTGCCCGACTATGTGTCGCAGGACGCCGACAAGGTGACCTTCGTCCGCGTTCCGACGCTCGACGAAGTGCCCTATCCGGTGAAGATGGAACCGAATCTGGTCGTCGAATTCTATTCGCGCTAA
PROTEIN sequence
Length: 204
MSKRHASKYKIDRRLGENIWGRPKSSVNRRSYGPGQHGQRRKSKISDFGIQLRAKQKLKGYYGDITEKQFKRTYQEASRMKGDTGQNLIGLLEQRLDAVVYRSKFAPTIFSARQVVSHGHIYVNGVKCNIASRRVRPGDVISLGKKAKEMALIAEAQALPEREVPDYVSQDADKVTFVRVPTLDEVPYPVKMEPNLVVEFYSR*