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scnpilot_p_inoc_scaffold_80_103

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(123115..123450)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional repressor NrdR n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8Y0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 110.0
  • Bit_score: 176
  • Evalue 1.10e-41
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadace similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 108.0
  • Bit_score: 179
  • Evalue 3.10e-42
nrdR; transcriptional regulator NrdR similarity KEGG
DB: KEGG
  • Identity: 83.0
  • Coverage: 106.0
  • Bit_score: 175
  • Evalue 9.00e-42

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
GTGCAACTGCGCGAAATCACCGTGGTGAAAAGCAACGACCAGCGCGAACCGTTCGACCGTTCAAAGATCGAGCAATCCGTCGCGCTGGCCTGCCGCAAGCGCGGCATTGCACAGGAACGGCTGGACCAGCTCGTTTCGGGCATCCAGCGCCAGATCGAAACGCTGGGCGACAGCGAAGTGCCGTCCAAGGCGATTGGCGAAATGGTGATGGAAGGCCTGCGCGCGCTCGACAGTGTGGCCTATATTCGCTTTGCCAGCGTCTATCGCGACTTTTCCGAGGCGCGCGATTTCGAGGAATTTGCCGGCAACGTGCGCGACGCGGGGCATAAGAAATGA
PROTEIN sequence
Length: 112
VQLREITVVKSNDQREPFDRSKIEQSVALACRKRGIAQERLDQLVSGIQRQIETLGDSEVPSKAIGEMVMEGLRALDSVAYIRFASVYRDFSEARDFEEFAGNVRDAGHKK*