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scnpilot_p_inoc_scaffold_187_71

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 70077..71561

Top 3 Functional Annotations

Value Algorithm Source
ABC-type oligopeptide transport system, periplasmic component n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZP45_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 44.7
  • Coverage: 501.0
  • Bit_score: 389
  • Evalue 3.70e-105
ABC-type oligopeptide transport system, periplasmic component {ECO:0000313|EMBL:EJL21111.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; similarity UNIPROT
DB: UniProtKB
  • Identity: 44.7
  • Coverage: 501.0
  • Bit_score: 389
  • Evalue 5.20e-105
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 41.1
  • Coverage: 509.0
  • Bit_score: 364
  • Evalue 6.10e-98

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Taxonomy

Novosphingobium sp. AP12 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1485
ATGCTGCGCAGGAACCGCATCTCCATTCTGATGGCCGCCCTTTTGGCGGCGGCCTGCCATGGCTCGGCCCAGCAGCAACCGCTGCGGGTGGTGATGGTCAATGATTCGGGCCCTGCCGCGCTCGATCGCGAATTGCGCGCGGCCACGGCCGAAGGTCTGGTCAGTCTGGATGAGGAGGGCAAGGTCGTGCCCGGTCTGGCCGAACGCTGGATCGTGGCGGATGAAGGGCGTGGCTATATCTTCCGCTTGCGCGACAGTGCGTGGCCCGACGGCACGAAACTGAGCGGCGAGACGGCCCGACAGGCGCTGCGCCGCGCCATTGCCGCGCAGAAAGGTCGCGCGCTGGGGCAGGATCTGACGATCATCGAGGATATTCGCGCGATGGCCGGGCGCGTGATCGAAATCCGGCTGGCCCAGCCCATGCCCAATTTCCTGCAATTGCTGGCCCAGCCCGAACTGGGGCTGGAGCATCGCGGGCAAGGCGCCGGGCCGATGCGGCGCAAACATGTCGAGGGGCTGGACTGGCTGACTCCGATTTCACCCGATGCGCGCGGCCTGCCCATGCCCGAGGGCTGGGCCGCGACGATGCGGCCGCTTTCGATTCGCGCGATGGGCGGCGAAAAGGCGGTGGCGGATTTGCTGGGCGGGCAGGTCGATGTGGTGCTGGGCGGGCGGATCACCGATCTGCCGCTGATTCAGCGGGGCCTGCTGGGCCAGCGGGCGGCGCGCTTCGATGTGACGCCGGGCCTGTTCGGCCTGCTGGTGGAAAAGGGCAGCGGCTTTCTGGCGGTGCCGACGAATCGCGCCGCGTTGGCCATGGTGATCGACCGCGCGGCGCTGGTGAACGCCTTGGGCATGCAGGCGGGCGGCATCCCGGGATGGAGCCCCACCACGCGGCTGATCTCGCCGGGCATCGGCGAAGTGCAGCTTCCCGAGCGCTGGACCGATATGGATATGGACCACCGCCGCGCCGTGGCGGTCGAGCGGGTGGCGGTGTGGAGCAAGGCCCGCGCCCCGACCGCCCGGCCCGAGGAGGGCGACGGGCTGGAATTGCGGATCGCAATGCCGGGCGGCGCGGGGAGCAATGTGCTGTTTTCCCGGCTGGCGCAGGATGTGGCGGCGATCGGGCTGCGGCTGCGCCGGGTGGGGATGGGCGAGTCGGCGGATCTGCGTGTGATTGATGAAGTGGCGCGTTATCCTTCGCCGGTTTGGTTTTTTAACCAGTTGCATTGCGGTGTGCATTCCGTATGCACACCCGATGTGGACCATCTGGTGGCCCAGGCATGGAATGTCGAAGCCTCCCTTGCCCCCGCCCTTTATGCCGAGGCCGAGCGCGAGGTGATGGAGGCCAATCTGTTCATTCCACTGGCTTTACCGGTGCGCTGGACCATGATCGGCAGGGGGGCGGGCAACGGTTTGCGCGGCCTTGTGCCCAATGCCTATGGGGTTCACCCTTTTTACCCTTTGGCCGATGGGGCGCGTTAG
PROTEIN sequence
Length: 495
MLRRNRISILMAALLAAACHGSAQQQPLRVVMVNDSGPAALDRELRAATAEGLVSLDEEGKVVPGLAERWIVADEGRGYIFRLRDSAWPDGTKLSGETARQALRRAIAAQKGRALGQDLTIIEDIRAMAGRVIEIRLAQPMPNFLQLLAQPELGLEHRGQGAGPMRRKHVEGLDWLTPISPDARGLPMPEGWAATMRPLSIRAMGGEKAVADLLGGQVDVVLGGRITDLPLIQRGLLGQRAARFDVTPGLFGLLVEKGSGFLAVPTNRAALAMVIDRAALVNALGMQAGGIPGWSPTTRLISPGIGEVQLPERWTDMDMDHRRAVAVERVAVWSKARAPTARPEEGDGLELRIAMPGGAGSNVLFSRLAQDVAAIGLRLRRVGMGESADLRVIDEVARYPSPVWFFNQLHCGVHSVCTPDVDHLVAQAWNVEASLAPALYAEAEREVMEANLFIPLALPVRWTMIGRGAGNGLRGLVPNAYGVHPFYPLADGAR*