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scnpilot_p_inoc_scaffold_187_112

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(114207..115619)

Top 3 Functional Annotations

Value Algorithm Source
Heavy metal cation tricomponent efflux outer membrane porin ZneC n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7I8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 461.0
  • Bit_score: 491
  • Evalue 8.50e-136
  • rbh
RND efflux system of outer membrane lipoprotein, nodT family {ECO:0000313|EMBL:GAO55355.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; N similarity UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 470.0
  • Bit_score: 530
  • Evalue 2.30e-147
metal transporter similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 464.0
  • Bit_score: 473
  • Evalue 8.90e-131

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1413
ATGAGCATGACCGCCCTTTTGCTGGCCGCAACGGTTCCCGCACTGCCTTTGCCTCCGACGCCGGCGGGCAACGCGCCCGCCTCGGTGCTGAGCGCCCCGGTGGCGCCCGAGGGCGGCCCGGCGCAGGCCATTGCCGTGGGGGCCCCGGTCCCCGCGCAATGGTGGCGCGAATTCGGCAATGACGCGCTCAATGCGCTGGTCGAACGCAGCCTGAGCGCCAACCCCGACATCGCCGCGGCCGATGCCACCCTGCGTCAGGCGCAGGAACTGGCGCGCGCCTCGGTAGGCGGGCTGCTGCCCCAGGTCGATGCGGGCTATCAGGCGAGTCGCGCGCGGACCAGCAACACGATCGCACCGGTTCTGGCTGATCAGAATGTGTTGCTCTACACCCTCCACACCGCGCAGGTCAGCCTGTCCTGGTCGCCCGATGTGTTCGGCGGCGGGCGGGCGCGGGTGCGCTCGGCGCAGGCGGCGGCGCGGGCGCAGGCGGCAAGGGCCGACGCGGCGCGCTCAATGGTTGTGGCCAATCTGGTGCAGTCGGCGATCCAATATGCCGCGCTGGGCGAGGAGATCGACGCGACCCGCGATGCCGTCACCGCCTATCGCGATGTGCTGGCGCTGATCAAGCTGCGCCAGAAGATCGGCGCGGTGGGCGCCTCGGACGTGGCGGCGCAGGAAACCGCGCTGGCCGCGATCGAGGGGCAATTGCCGGGGCTGGAGCGCGCGCGCAAGGCGCAGGAGGCCCAGATCGCCGTGCTGATCGGCGTGGCGCCGGGTTCGCCTTTGCCCCCCGTGCCGCGCATGGATGAACTGACCCTGCCCGCGCAATTGCCCTTGAGCCTGCCCGCGCAGGTGGTCGCCCATCGCCCCGATGTGCGCAGCGCCGCCGCGATCATGGAAGGCGCCTCGGCCGATGCCAAGGCCGCCGTGGCCGCCCGTCTGCCCTCCTTTACGCTCAGCGCGCAATATGGCGGCACGGCCAACACATTTGCCGACATGTTCGCAACCGGCAATCCGTTCTGGACGCTGCTGGGCGGGGTGTCGGCGCCGATCTTCCATGCCGGATCGCTGCTGCACCAAAGCCACGCCGCCAAGGCCGCGCTGGAGGCCGCGCAGGCGCAGTATCGCTCGACCGCGCTTCAGGCCTTTGCCGATGTCTCGAACGCGCTGACCGCAATCAAGACCGATGGCGATGCGCTGGCCGCCGCCGACCGGGGCAACCGCGCCTCGGCCGACAATCTGAACTTTACCCGCCGCCAATATGAACTGGGCGCGGTCGGCACTTTCACCTTGCTGCCGGTTCTGGCCGCCAGGGCCGAGGCGCGCAGCACATGGGTGCAGGCCCGCGCGGCGCGGCTGGTCGATACGGTGGCGCTCTACCAATCGCTGGGCGGCGGAACCGGCCAGAAATAA
PROTEIN sequence
Length: 471
MSMTALLLAATVPALPLPPTPAGNAPASVLSAPVAPEGGPAQAIAVGAPVPAQWWREFGNDALNALVERSLSANPDIAAADATLRQAQELARASVGGLLPQVDAGYQASRARTSNTIAPVLADQNVLLYTLHTAQVSLSWSPDVFGGGRARVRSAQAAARAQAARADAARSMVVANLVQSAIQYAALGEEIDATRDAVTAYRDVLALIKLRQKIGAVGASDVAAQETALAAIEGQLPGLERARKAQEAQIAVLIGVAPGSPLPPVPRMDELTLPAQLPLSLPAQVVAHRPDVRSAAAIMEGASADAKAAVAARLPSFTLSAQYGGTANTFADMFATGNPFWTLLGGVSAPIFHAGSLLHQSHAAKAALEAAQAQYRSTALQAFADVSNALTAIKTDGDALAAADRGNRASADNLNFTRRQYELGAVGTFTLLPVLAARAEARSTWVQARAARLVDTVALYQSLGGGTGQK*