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SCNPILOT_EXPT_750_P_Bacteroidia_45_5.3_partial

SCNPILOT_EXPT_750_P_Bacteroidales_45_6
In projects: SCNPILOT_EXPT_750_P  |  SCN_92

Consensus taxonomy: Bacteroidales  →  Bacteroidia  →  Bacteroidetes  →  Bacteria

Description

highly fragmented

Displaying items 801-850 of 907 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
scnpilot_expt_750_p_scaffold_47066
Species: Flavihumibacter petaseus (100%)
1 1198 bp 56.43 5.84 99.92
scnpilot_expt_750_p_scaffold_59031
Species: Parabacteroides johnsonii (100%)
1 1048 bp 63.07 3.34 99.90
scnpilot_expt_750_p_scaffold_33358
Species: Prevotella sp. CAG:732 (100%)
1 1470 bp 45.65 2.38 99.80
scnpilot_expt_750_p_scaffold_38942
Species: Flammeovirgaceae bacterium 311 (100%)
1 1340 bp 44.40 5.97 99.85
scnpilot_expt_750_p_scaffold_24848
Species: Dysgonomonas mossii (100%)
1 1762 bp 48.13 4.97 99.94
scnpilot_expt_750_p_scaffold_60014
Species: GWB2_Bacteroidetes_41_8_curated (100%)
1 1037 bp 40.31 6.03 96.62
scnpilot_expt_750_p_scaffold_33622
Species: Parabacteroides merdae (100%)
1 1463 bp 46.41 4.78 99.86
scnpilot_expt_750_p_scaffold_24346
Species: Bacteroides sp. CAG:530 (100%)
1 1786 bp 42.39 5.88 93.39
scnpilot_expt_750_p_scaffold_40339
Species: Bacteroides sp. HPS0048 (100%)
1 1313 bp 48.36 4.95 99.85
scnpilot_expt_750_p_scaffold_33886
Species: Dysgonomonas gadei (100%)
1 1457 bp 50.79 6.01 99.86
scnpilot_expt_750_p_scaffold_62866
Species: Parabacteroides sp. CAG:409 (100%)
1 1008 bp 43.06 3.47 79.46
scnpilot_expt_750_p_scaffold_53114
Species: Parabacteroides goldsteinii (100%)
1 1116 bp 61.20 2.24 99.73
scnpilot_expt_750_p_scaffold_28755
Species: Dysgonomonas gadei (100%)
1 1609 bp 48.23 5.59 99.94
scnpilot_expt_750_p_scaffold_36132
Species: Dysgonomonas gadei (100%)
1 1402 bp 47.57 8.02 99.93
scnpilot_expt_750_p_scaffold_34376
Species: Dysgonomonas gadei (100%)
1 1444 bp 49.03 5.54 99.93
scnpilot_expt_750_p_scaffold_22569
Species: RBG_16_Planctomycetes_64_10_curated (100%)
1 1873 bp 35.40 2.80 72.08
scnpilot_expt_750_p_scaffold_37466
Species: Dysgonomonas gadei (100%)
1 1371 bp 45.81 3.46 56.46
scnpilot_expt_750_p_scaffold_19020
Species: Bacteroides nordii (100%)
1 2088 bp 49.23 5.75 100.00
scnpilot_expt_750_p_scaffold_16016
Species: Dysgonomonas gadei (100%)
1 2346 bp 47.31 6.50 91.30
scnpilot_expt_750_p_scaffold_34396
Species: Bacteroides plebeius (100%)
1 1444 bp 41.20 5.37 99.93
scnpilot_expt_750_p_scaffold_54519
Species: Flavobacterium beibuense (100%)
1 1099 bp 39.85 4.55 54.60
scnpilot_expt_750_p_scaffold_58728
Species: Bacteroides cellulosilyticus CAG:158 (100%)
1 1051 bp 34.35 2.85 65.65
scnpilot_expt_750_p_scaffold_48818
Species: Flavihumibacter sp. ZG627 (100%)
1 1172 bp 36.69 3.41 43.77
scnpilot_expt_750_p_scaffold_54267
Species: RLO_Flavobacteria_35_11 (100%)
1 1102 bp 45.64 2.95 99.91
scnpilot_expt_750_p_scaffold_47892
Species: Bacteroides fragilis (100%)
1 1186 bp 46.63 8.64 92.58
scnpilot_expt_750_p_scaffold_56760
Species: Dysgonomonas mossii (100%)
1 1073 bp 48.74 5.59 99.81
scnpilot_expt_750_p_scaffold_7118
Species: Dysgonomonas mossii (100%)
1 4320 bp 55.05 5.32 99.93
scnpilot_expt_750_p_scaffold_34921
Species: Bacteroides sp. CAG:530 (100%)
1 1430 bp 47.76 5.07 91.47
scnpilot_expt_750_p_scaffold_21146
Species: Dysgonomonas gadei (100%)
1 1952 bp 48.00 6.02 92.52
scnpilot_expt_750_p_scaffold_29619
Species: Dysgonomonas mossii (100%)
1 1579 bp 51.04 4.12 99.94
scnpilot_expt_750_p_scaffold_39325
Species: Parabacteroides goldsteinii (100%)
1 1333 bp 41.26 3.19 99.93
scnpilot_expt_750_p_scaffold_17729
Species: Bacteroides sp. CAG:709 (100%)
1 2182 bp 33.32 5.27 40.28
scnpilot_expt_750_p_scaffold_50632
Species: Parabacteroides gordonii (100%)
1 1146 bp 49.13 4.36 99.74
scnpilot_expt_750_p_scaffold_13198
Species: Paludibacter propionicigenes (100%)
1 2676 bp 50.07 4.48 85.99
scnpilot_expt_750_p_scaffold_38759
Species: Chlamydia sp. 'Rubis' (100%)
1 1344 bp 31.47 3.35 76.34
scnpilot_expt_750_p_scaffold_56266
Species: Bacteroides sp. HPS0048 (100%)
1 1078 bp 41.09 3.71 99.91
scnpilot_expt_750_p_scaffold_54034
Species: Prevotella sp. CAG:1185 (100%)
1 1104 bp 31.25 2.94 34.24
scnpilot_expt_750_p_scaffold_10488
Species: Dysgonomonas mossii (100%)
1 3154 bp 40.55 3.33 94.17
scnpilot_expt_750_p_scaffold_14034
Species: Dysgonomonas gadei (100%)
1 2563 bp 50.33 6.83 87.90
scnpilot_expt_750_p_scaffold_52460
Species: Dysgonomonas gadei (100%)
1 1123 bp 55.92 3.56 99.91
scnpilot_expt_750_p_scaffold_56532
Species: Tannerella sp. CAG:118 (100%)
1 1075 bp 40.56 3.49 80.37
scnpilot_expt_750_p_scaffold_19330
Species: Bacteroides xylanisolvens (100%)
1 2066 bp 42.55 4.84 99.90
scnpilot_expt_750_p_scaffold_48853
Species: Bacteroides nordii (100%)
1 1171 bp 50.38 2.99 99.66
scnpilot_expt_750_p_scaffold_11597
Species: Prevotella sp. CAG:1058 (100%)
1 2941 bp 46.41 4.85 80.99
scnpilot_expt_750_p_scaffold_11601
Species: Pedobacter kyungheensis (100%)
1 2939 bp 47.53 3.74 98.61
scnpilot_expt_750_p_scaffold_60357
Species: Paludibacter propionicigenes (100%)
1 1034 bp 42.55 4.84 99.81
scnpilot_expt_750_p_scaffold_48350
Species: Dysgonomonas mossii (100%)
1 1179 bp 45.38 6.79 84.73
scnpilot_expt_750_p_scaffold_30149
Species: Bacteroides ovatus (100%)
1 1563 bp 63.92 3.68 99.81
scnpilot_expt_750_p_scaffold_34447
Species: Tannerella forsythia (100%)
1 1442 bp 50.76 3.12 99.86
scnpilot_expt_750_p_scaffold_60620
Species: Dysgonomonas mossii (100%)
1 1031 bp 45.49 5.82 91.08
Displaying items 801-850 of 907 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.