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SCNPILOT_EXPT_750_P_Bacteroidia_45_5.3_partial

SCNPILOT_EXPT_750_P_Bacteroidales_45_6
In projects: SCNPILOT_EXPT_750_P  |  SCN_92

Consensus taxonomy: Bacteroidales  →  Bacteroidia  →  Bacteroidetes  →  Bacteria

Description

highly fragmented

Displaying items 851-900 of 907 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
scnpilot_expt_750_p_scaffold_55597
Species: Parabacteroides gordonii (100%)
1 1086 bp 41.25 4.14 99.72
scnpilot_expt_750_p_scaffold_14573
Species: Dysgonomonas mossii (100%)
1 2497 bp 48.18 4.00 97.80
scnpilot_expt_750_p_scaffold_54577
Species: uncultured bacterium (100%)
1 1098 bp 49.64 1.82 100.00
scnpilot_expt_750_p_scaffold_34719
Species: Parabacteroides distasonis (100%)
1 1436 bp 49.03 2.44 99.86
scnpilot_expt_750_p_scaffold_35431
Species: Draconibacterium orientale (100%)
1 1418 bp 46.54 4.23 99.86
scnpilot_expt_750_p_scaffold_40183
Species: Dysgonomonas gadei (100%)
1 1316 bp 48.78 3.80 69.98
scnpilot_expt_750_p_scaffold_43065
Species: Porphyromonas sp. 31_2 (100%)
1 1262 bp 45.64 5.15 99.84
scnpilot_expt_750_p_scaffold_45092
Species: Porphyromonadaceae bacterium ING2-E5B (100%)
1 1229 bp 41.50 4.07 78.36
scnpilot_expt_750_p_scaffold_55612
Species: Candidatus Caedibacter acanthamoebae (100%)
1 1086 bp 32.41 8.06 88.67
scnpilot_expt_750_p_scaffold_24199
Species: Dysgonomonas mossii (100%)
1 1792 bp 49.16 4.46 99.94
scnpilot_expt_750_p_scaffold_42633
Species: Bacteroides sp. HPS0048 (100%)
1 1270 bp 32.76 3.54 99.92
scnpilot_expt_750_p_scaffold_30434
Species: Dysgonomonas mossii (100%)
1 1554 bp 50.51 3.86 99.81
scnpilot_expt_750_p_scaffold_28350
Species: Parabacteroides goldsteinii (100%)
1 1623 bp 48.61 4.00 82.26
scnpilot_expt_750_p_scaffold_53225
Species: Bacteroides pectinophilus CAG:437 (100%)
1 1114 bp 28.73 2.69 99.64
scnpilot_expt_750_p_scaffold_43847
Species: Bacteroides plebeius (100%)
1 1249 bp 39.55 3.20 76.86
scnpilot_expt_750_p_scaffold_16630
Species: Dysgonomonas gadei (100%)
1 2286 bp 39.55 2.95 76.25
scnpilot_expt_750_p_scaffold_35208
Species: Bacteroides plebeius (100%)
1 1423 bp 49.12 4.57 99.93
scnpilot_expt_750_p_scaffold_10306
Species: Paludibacter propionicigenes (100%)
1 3194 bp 41.39 4.85 89.23
scnpilot_expt_750_p_scaffold_61558
Species: Bacteroides nordii (100%)
1 1021 bp 48.97 4.41 99.61
scnpilot_expt_750_p_scaffold_12688
Species: Dysgonomonas gadei (100%)
1 2755 bp 35.43 5.44 96.91
scnpilot_expt_750_p_scaffold_50459
Species: Parabacteroides sp. HGS0025 (100%)
1 1149 bp 51.61 5.87 99.74
scnpilot_expt_750_p_scaffold_39929
Species: GWE2_Bacteroidetes_42_39_curated (100%)
1 1321 bp 46.03 5.30 93.57
scnpilot_expt_750_p_scaffold_17561
Species: Parabacteroides sp. CAG:409 (100%)
1 2199 bp 51.25 5.91 94.27
scnpilot_expt_750_p_scaffold_41642
Species: Bacteroides fragilis (100%)
1 1288 bp 56.52 4.66 67.55
scnpilot_expt_750_p_scaffold_23531
Species: Dysgonomonas mossii (100%)
1 1822 bp 51.04 6.17 99.95
scnpilot_expt_750_p_scaffold_38333
Species: Bacteroides clarus CAG:160 (100%)
1 1352 bp 36.46 4.44 99.85
scnpilot_expt_750_p_scaffold_32998
Species: Dysgonomonas mossii (100%)
1 1479 bp 48.41 2.70 99.80
scnpilot_expt_750_p_scaffold_52284
Species: Paludibacter propionicigenes (100%)
1 1125 bp 45.78 5.33 84.27
scnpilot_expt_750_p_scaffold_12698
Species: Paludibacter propionicigenes (100%)
1 2754 bp 51.13 4.72 99.89
scnpilot_expt_750_p_scaffold_47240
Species: Luteibacter yeojuensis (100%)
1 1196 bp 65.38 4.81 99.83
scnpilot_expt_750_p_scaffold_29727
Species: Pontibacter korlensis (100%)
1 1576 bp 40.10 3.97 99.94
scnpilot_expt_750_p_scaffold_16410
Species: Bacteroides ovatus (100%)
1 2307 bp 36.97 3.36 90.64
scnpilot_expt_750_p_scaffold_22716
Species: Flavihumibacter petaseus (100%)
1 1865 bp 42.84 3.75 96.19
scnpilot_expt_750_p_scaffold_24768
Species: Dysgonomonas gadei (100%)
1 1766 bp 48.58 3.11 96.66
scnpilot_expt_750_p_scaffold_50996
Species: Bacteroides salyersiae (100%)
1 1142 bp 43.96 2.63 99.82
scnpilot_expt_750_p_scaffold_18837
Species: Bacteroides sp. CAG:189 (100%)
1 2100 bp 43.10 7.14 99.86
scnpilot_expt_750_p_scaffold_51316
Species: Parabacteroides sp. CAG:409 (100%)
1 1138 bp 34.89 4.39 99.91
scnpilot_expt_750_p_scaffold_25737
Species: Chlamydia sp. 'Rubis' (100%)
1 1723 bp 31.17 3.19 72.26
scnpilot_expt_750_p_scaffold_33546
Species: Flavobacterium sp. EM1321 (100%)
1 1465 bp 49.56 3.41 99.93
scnpilot_expt_750_p_scaffold_48189
Species: Flavihumibacter petaseus (100%)
1 1181 bp 42.42 4.66 86.62
scnpilot_expt_750_p_scaffold_27068
Species: Parabacteroides distasonis (100%)
1 1671 bp 40.22 3.89 100.00
scnpilot_expt_750_p_scaffold_38892
Species: Dysgonomonas gadei (100%)
1 1341 bp 44.82 4.47 89.04
scnpilot_expt_750_p_scaffold_50514
Species: Dysgonomonas gadei (100%)
1 1148 bp 40.42 6.32 50.44
scnpilot_expt_750_p_scaffold_32280
Species: Bacteroides sp. 2_1_33B (100%)
1 1499 bp 46.36 4.00 77.45
scnpilot_expt_750_p_scaffold_37140
Species: Tannerella forsythia (100%)
1 1379 bp 47.57 3.26 99.86
scnpilot_expt_750_p_scaffold_28439
Species: Dysgonomonas gadei (100%)
1 1620 bp 48.77 3.70 99.81
scnpilot_expt_750_p_scaffold_53314
Species: Bacteroides sp. CAG:633 (100%)
1 1113 bp 66.31 5.17 91.64
scnpilot_expt_750_p_scaffold_31913
Species: Geofilum rubicundum (100%)
1 1509 bp 46.32 3.15 86.08
scnpilot_expt_750_p_scaffold_31914
Species: Geofilum rubicundum (100%)
1 1509 bp 47.38 5.80 94.63
scnpilot_expt_750_p_scaffold_41200
Species: Dysgonomonas gadei (100%)
1 1296 bp 46.99 4.24 92.13
Displaying items 851-900 of 907 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.