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scnpilot_expt_750_bf_scaffold_2446_6

Organism: SCNPILOT_EXPT_750_BF_Sphingobacterium_39_4_fragment

partial RP 20 / 55 BSCG 17 / 51 ASCG 2 / 38
Location: 5947..6423

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor rpoD n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MW39_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 140.0
  • Bit_score: 270
  • Evalue 1.40e-69
RNA polymerase sigma factor rpoD similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 140.0
  • Bit_score: 270
  • Evalue 3.80e-70
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CDS95937.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphi similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 140.0
  • Bit_score: 270
  • Evalue 1.90e-69

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Taxonomy

Sphingobacterium sp. PM2-P1-29 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 477
ATGAGACAGCTCAAAATTACACAATCTATCACCAATCGTGAGTCACAGTCTTTGGACAAATACTTACACGAAATTGGTAAAGTAGACTTAATTACAGCAGAAGAAGAAGTAGAATTAGCACAGCGTATCCGCGAAGGCGATCAAGTTGCCTTGGAAAAATTGACTAAAACCAACCTTCGTTTCGTAGTATCAGTAGCAAAACAATATCAAAATCAAGGTTTAACCTTAGGTGATTTAATCAATGAAGGTAACCTGGGCTTAATTAAAGCAGCTAAACGTTTTGACGAAACAAAGGGGTTTAAATTCATTTCTTATGCCGTTTGGTGGATTCGCCAATCTATTCTTCAAGCAATTGCTGAACAATCGCGTATCGTACGTCTGCCATTGAATCAAGTTGGTTCATTGAGCAAAATCAGTAAGGATACGAACGGGAACCATCTCCAGAAGAATTGGCGGATATCCTTGAAACCACAGTAG
PROTEIN sequence
Length: 159
MRQLKITQSITNRESQSLDKYLHEIGKVDLITAEEEVELAQRIREGDQVALEKLTKTNLRFVVSVAKQYQNQGLTLGDLINEGNLGLIKAAKRFDETKGFKFISYAVWWIRQSILQAIAEQSRIVRLPLNQVGSLSKISKDTNGNHLQKNWRISLKPQ*