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scnpilot_p_inoc_scaffold_2453_8

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(7333..8022)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VFR9_SPHWW similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 229.0
  • Bit_score: 379
  • Evalue 3.00e-102
  • rbh
two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 229.0
  • Bit_score: 379
  • Evalue 8.50e-103
  • rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABQ71135.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sp similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 229.0
  • Bit_score: 379
  • Evalue 4.20e-102

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Taxonomy

Sphingomonas wittichii → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGAGTCAGAAGATCCTGGTGGTGGAAGATGACGCGGGCATCGCGGATTTCATCGCCGGCGGCCTTACCGAACATGGCTTCGTGGTGGACCGGGCCGAGAACGGGCGGGACGGGCTGTTCCTGGCCACGGACGGCACCTATGACTGTATCGTGCTGGACCGGATGCTGCCCGGCATGGACGGAATGGCGGTGCTGAAGGCTGTGCGCGCGGCGGGCATTGAAACGCCGATCATCATTCTGTCCGCCCTGGGTTCGACCGAGAACCGGATCGAGGGGCTGGAAGGCGGATCGGACGATTACCTGACCAAGCCCTTCGCCTTCGCCGAATTGCTGGCCCGCATCCGCCTGCTGATCCGGCGTTCCAAGGGCCAGGGCCCCACGCCCGAAACGCGCCTGTCCTGCGACGATCTGGAAATGGACCTGATCGCCCGCAAGGTTCGGCGCGACGGCAAGGGGATCGAGCTGCAACCCCGCGAGTTCCGCCTGCTGGAATATTTCCTGCGCAATGTGGGGCAAGTCGTCACCCGCACCATGCTGCTGGAAGGCGTGTGGGATTATCACTTCGATCCCGGCACCAATGTCATCGACGTGCATGTCAGCCGGTTGCGCAAGAAGATCGACGAGAATTTCGCCCGCCCGCTGCTCCATACCGTTCGCGGATCGGGCTATCGGCTGGGCATTGAACCCTGA
PROTEIN sequence
Length: 230
MSQKILVVEDDAGIADFIAGGLTEHGFVVDRAENGRDGLFLATDGTYDCIVLDRMLPGMDGMAVLKAVRAAGIETPIIILSALGSTENRIEGLEGGSDDYLTKPFAFAELLARIRLLIRRSKGQGPTPETRLSCDDLEMDLIARKVRRDGKGIELQPREFRLLEYFLRNVGQVVTRTMLLEGVWDYHFDPGTNVIDVHVSRLRKKIDENFARPLLHTVRGSGYRLGIEP*