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scnpilot_p_inoc_scaffold_3622_5

Organism: scnpilot_dereplicated_Eukaryote_unknown_16

partial RP 39 / 55 MC: 26 BSCG 17 / 51 MC: 6 ASCG 21 / 38 MC: 8
Location: 3188..3778

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: exosome complex component RRP43 n=1 Tax=Alligator sinensis RepID=UPI0003C292C8 similarity UNIREF
DB: UNIREF100
  • Identity: 34.2
  • Coverage: 155.0
  • Bit_score: 96
  • Evalue 3.30e-17
similar to Exosome component 8; K12586 exosome complex component RRP43 similarity KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 156.0
  • Bit_score: 94
  • Evalue 3.10e-17
Exosome complex exonuclease RRP43 {ECO:0000313|EMBL:ACO11735.1}; TaxID=217165 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Maxillopoda; Copepoda; Siphonostomatoida; Caligidae; Caligu similarity UNIPROT
DB: UniProtKB
  • Identity: 34.0
  • Coverage: 159.0
  • Bit_score: 92
  • Evalue 8.80e-16

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Taxonomy

Caligus rogercresseyi → Caligus → Siphonostomatoida → Copepoda → Arthropoda → Metazoa

Sequences

DNA sequence
Length: 591
ATGTCCAACGCGTCGCTGTCAGTCTTCCTCCGCGACCTGGCCCTCAACGCGCGCGTGCTGCGTCCCGCGCAACTGGGCATCATCGAGGGCGTTGCCGCCTGGCTCGTCCGCGCCGACATCGTTGTGCTGAACGACGACGGCAACACGCGCGACGCGTGTGTGCTCGCGCTCGTCCACGCCATCTCGGCGCTCGAACTCCCTGAAACCACTGCGCCCGACGACAAAGAGGTCTACGTCATCCGCGGCGGGCTCGCGCGCTCGCTGGGGCTCTCCGCGCGCGACCTGGTTGTGCCGGTCACCTTCGCGGCGATGCCTGATGGTGTTACGCTGGTTGACCCGACTGCGCGTGAGGAGGAGCTCGCACTCGATCTCTACACTCTGGTCTTCACGGCCCAGGGCGCCGTTGCGGGCGTCTACAAGCCCGGGGGCGAGCCACTCGCACAGGACGCCATGCTGCACGCTATGAAGCTTGCTGCCAAGCGCGCGGGAGGCTGGTTCCGCGCGGCTGCGACCGCGGCGGACGACGCGGAGGGCGGCGCTAAGGCGGGCCGGATGGTCGTGCCGCTCGTCGCCAACGAGACAGAGCTCTGA
PROTEIN sequence
Length: 197
MSNASLSVFLRDLALNARVLRPAQLGIIEGVAAWLVRADIVVLNDDGNTRDACVLALVHAISALELPETTAPDDKEVYVIRGGLARSLGLSARDLVVPVTFAAMPDGVTLVDPTAREEELALDLYTLVFTAQGAVAGVYKPGGEPLAQDAMLHAMKLAAKRAGGWFRAAATAADDAEGGAKAGRMVVPLVANETEL*