name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_300_bf_scaffold_1118_1
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..877)
----------------- DNA (876bp) protein (292aa) |
fatty-acyl-CoA synthase (EC:6.2.1.-)
Fatty-acyl-CoA synthase {ECO:0000313|EMBL:CCA90596.1}; EC=6.2.1.- {ECO:0000313|EMBL:CCA90596.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadace
Fatty-acyl-CoA synthase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IE71_9SPHN
|
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SCNpilot_expt_300_bf_scaffold_1118_2
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(874..2277)
----------------- DNA (1404bp) protein (468aa) |
Aldehyde dehydrogenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7P1_NOVAD
rbh
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:ABD26132.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
|
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SCNpilot_expt_300_bf_scaffold_1118_3
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2298..3785)
----------------- DNA (1488bp) protein (496aa) |
TonB-dependent receptor n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7P2_NOVAD
rbh
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ABD26131.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
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SCNpilot_expt_300_bf_scaffold_1118_4
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3782..4519)
----------------- DNA (738bp) protein (246aa) |
TonB-dependent receptor n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IE73_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:KHS46723.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
TonB-dependent receptor
|
|
SCNpilot_expt_300_bf_scaffold_1118_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4535..4825)
----------------- DNA (291bp) protein (97aa) |
Cytochrome c, class I n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7P3_NOVAD
Cytochrome c in methylamine utilization cluster {ECO:0000313|EMBL:GAO57025.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobiu
cytochrome c, class I
|
|
SCNpilot_expt_300_bf_scaffold_1118_6
unknown
|
Not on your lists |
comp(4798..4953)
----------------- DNA (156bp) protein (52aa) |
This feature has no annotations |
|
SCNpilot_expt_300_bf_scaffold_1118_7
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4950..5399)
----------------- DNA (450bp) protein (150aa) |
Cytochrome c, class I n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7P4_NOVAD
cytochrome c, class I
Cytochrome c, class I {ECO:0000313|EMBL:ABD26129.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sou
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SCNpilot_expt_300_bf_scaffold_1118_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5396..5944)
----------------- DNA (549bp) protein (183aa) |
Methylamine dehydrogenase light chain {ECO:0000313|EMBL:GAO57023.1}; EC=1.4.9.1 {ECO:0000313|EMBL:GAO57023.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
amine dehydrogenase (EC:1.4.99.3)
Amine dehydrogenase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z5K2_9SPHN
rbh
|
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SCNpilot_expt_300_bf_scaffold_1118_9
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5948..6538)
----------------- DNA (591bp) protein (197aa) |
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7P6_NOVAD
rbh
Methylamine utilization protein mauD {ECO:0000313|EMBL:GAO57022.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_1118_10
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6538..7035)
----------------- DNA (498bp) protein (166aa) |
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7P7_NOVAD
Methylamine utilization protein mauE {ECO:0000313|EMBL:GAO57021.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_1118_11
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7032..8213)
----------------- DNA (1182bp) protein (394aa) |
Methylamine dehydrogenase heavy chain {ECO:0000313|EMBL:GAO57020.1}; EC=1.4.9.1 {ECO:0000313|EMBL:GAO57020.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
amine dehydrogenase (EC:1.4.99.3)
Amine dehydrogenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7P8_NOVAD
rbh
|
|
SCNpilot_expt_300_bf_scaffold_1118_12
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8339..9025
----------------- DNA (687bp) protein (229aa) |
Transcriptional regulator, TetR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7P9_NOVAD
Transcriptional regulator of tetR family {ECO:0000313|EMBL:GAO57019.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
TetR family transcriptional regulator
|
|
SCNpilot_expt_300_bf_scaffold_1118_13
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9035..10654)
----------------- DNA (1620bp) protein (540aa) |
Acyl-CoA dehydrogenase (EC:1.3.99.3)
rbh
Acyl-CoA dehydrogenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W1R7_9SPHN
rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ENY81427.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp
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SCNpilot_expt_300_bf_scaffold_1118_14
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10781..11446
----------------- DNA (666bp) protein (222aa) |
NAD(P)H dehydrogenase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002883632
Putative NAD(P)H dehydrogenase {ECO:0000313|EMBL:GAM01386.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingo
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_1118_15
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11522..12691
----------------- DNA (1170bp) protein (390aa) |
Kynurenine--oxoglutarate transaminase {ECO:0000313|EMBL:KFG90237.1}; EC=2.6.1.7 {ECO:0000313|EMBL:KFG90237.1};; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
kynurenine--oxoglutarate transaminase (EC:2.6.1.7)
aminotransferase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6164C
rbh
|
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SCNpilot_expt_300_bf_scaffold_1118_16
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12683..12901)
----------------- DNA (219bp) protein (73aa) |
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000381A8FB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZP56952.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
|
|
SCNpilot_expt_300_bf_scaffold_1118_17
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12971..14371)
----------------- DNA (1401bp) protein (467aa) |
transporter n=1 Tax=Sphingomonas melonis RepID=UPI00037CB3B5
rbh
Sphingomonas taxi strain 30a NODE_20, whole genome shotgun sequence {ECO:0000313|EMBL:KIU27058.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
oprM2; Outer membrane protein OprM
|
|
SCNpilot_expt_300_bf_scaffold_1118_18
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14395..17451)
----------------- DNA (3057bp) protein (1019aa) |
multidrug transporter n=1 Tax=Sphingomonas melonis RepID=UPI0003807788
rbh
Sphingomonas taxi strain 30a NODE_20, whole genome shotgun sequence {ECO:0000313|EMBL:KIU27059.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
multidrug transporter
|
|
SCNpilot_expt_300_bf_scaffold_1118_19
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17493..18614)
----------------- DNA (1122bp) protein (374aa) |
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003738F0D
rbh
hemolysin D
Hemolysin D {ECO:0000313|EMBL:AIT08189.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
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SCNpilot_expt_300_bf_scaffold_1118_20
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18708..19442
----------------- DNA (735bp) protein (245aa) |
Transcriptional regulator n=1 Tax=Novosphingobium sp. AP12 RepID=J2HHD0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHL25882.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter me
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_1118_21
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19550..20206
----------------- DNA (657bp) protein (219aa) |
TonB-dependent receptor n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8TA56_9GAMM
TonB-dependent receptor {ECO:0000313|EMBL:KGB55146.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
TonB-dependent receptor plug
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