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SCNpilot_expt_300_bf_scaffold_1026_2

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(391..2577)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 730.0
  • Bit_score: 1329
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4C6E1 similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 731.0
  • Bit_score: 1343
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 731.0
  • Bit_score: 1320
  • Evalue 0.0

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2187
ATGGCGCTGCCTGAGACGATCACGCTGATGGACGTGTCGCCGAAGCAGCTCGTGTCGGTCGCCGCCTCGCTGATCCCGTTCCTTGAGAACGACGACGCGAACCGCGCGCTGATGGGCTCGAACATGCAGCGTCAGGCGGTGCCTTTGGTCAAGGCCGAGGCGCCGTTCGTCGGCACCGGCATGGAGGAGACGGTCGCGCGCGATTCCGGCGCCGCCATCGCCGCCCGCCGCGCCGGCGTGATCGACCAGGTCGATGCCAGCCGCATCGTCGTCCGCGCGACGGGCGAGGTTTCGGCCGAGGAATCGGGTGTCGACATCTACACGCTGATGAAGTTCCAGCGCTCCAACCAGTCGACCTGCATCAACCAGCGCCCGCTGGTGAAGGTGGGCGACGTGGTGCGCGCCGGCGACATCATCGCCGACGGCCCGTCGACCGAATTCGGCGAGCTGGCGCTGGGCCGCAACGCGCTCGTCGCGTTCATGCCGTGGAACGGCTACAACTACGAGGACTCGATCCTCATCTCCGAGCGGATCGTGAAGGACGACGTGTTCACCTCGATCCACATCGACGAGTTCGAGGTGGCCGCCCGCGACACGAAGCTCGGGCCGGAGGACATCACCCGCGACATCCCGAACGTCGGCGAGGAGGCGCTGCGCAACCTCGACGAGGCGGGCATCGTCTATATCGGTGCCGAGGTGGAGCCGGGCGACATCCTCGTCGGCAAGATCACGCCGAAGGGCGAAAGCCCGATGACGCCGGAGGAGAAATTGCTCCGCGCGATCTTCGGCGAGAAGGCGAGCGACGTGCGCGACACCTCGCTGCGCCTGCCGCCGGGCGTGGCCGGGACGATCGTCGACGTGCGCGTCTTCAACCGCCACGGCATCGACAAGGACGAGCGCGCGATGGCGATCGAGCGCGAGGAGATCGAGCGCCTGAAGAAGGACTCGGACGACGAGCGCACGATCCTCAACCGCGCCACCTGGTCGCGCCTGCGCGAGATGCTGCTGGATCAGGTCGCCACGGCGGCCCCCAAGGGCGTGCGCAAGGGCGTGACGATCGACGCCGAGGTGCTGGATTCGGTGGACCGCCACGAATGGTGGAAGTTCGCCGTGCAGGACGACAAGGTCCAGGGCGACCTGGAGACCGTCAAGGCGCAGTATGACGAGGCCGCCAAGCGGATCACCGACAAGTTCCACGACCGGCGCGAGAAGCTGGAGCGTGGCGACGAGTTGCCGCCGGGCGTGCTGAAGATGGTCAAGGTGTTCGTCGCGGTGAAGCGCAAGCTCCAGCCGGGCGACAAGATGGCCGGCCGTCACGGCAACAAGGGCGTCATCAGCCGCATCCTGCCGCAGGAGGACATGCCGTTCCTCGCGGACGGCACGCCGGTCGATCTGGTGCTCAACCCGCTGGGCGTGCCGTCGCGCATGAACGTCGGGCAGATCTTCGAGACCCATCTCGGCTGGGCCGCGCGCGGCCTCGGCCAGCAGGTTTCGCAGGCGCTGGAGGATTGGCGCGAGGCGAACCCCGATGCCCGCCCCGGCGCGATGCCGGAGCCGGTGAAGGATCGCCTGCGCACGATCTACGGCGAGCATTATCTCGCCGATATCGACGCGCGTGACGGCGAGGGCATCGTCGAGCTGGCGGAGAACCTGACGCGCGGCGTGCCGATGGGGACGCCGGTGTTCGACGGCGCGGTCGAGGCCGATGTCGCGGACATGCTGGAGCTGGCGGGCCTCGACCCGTCGGGCCAGTCGGACCTGTTCGACGGGCGCACCGGCGAGAAGTTCGACCGCAAGGTGACGGTGGGCATCATCTACATGCTCAAGCTGCACCACCTCGTGGACGACAAGATCCACGCGCGCTCGATCGGGCCGTACAGCCTCGTCACCCAGCAGCCGCTGGGCGGCAAGGCGCAGTTCGGCGGCCAGCGCTTCGGTGAGATGGAGGTGTGGGCGCTGCAGGCATATGGCGCCGCCTACACGCTCCAGGAGATGCTGACGGTGAAGTCCGACGACGTGGTCGGCCGCACCAAGGTCTATGAGGCGATCGTCAAGGGCGACGACACGTTCGAGGCCGGCATCCCGGAGAGCTTCAACGTGCTCGTCAAGGAAATGCGCTCGCTCGGCCTCAACGTCGATCTCAAGTCGATGGACGAGGACGACGGTCTGGCCGAGGCGGCGGAGTAA
PROTEIN sequence
Length: 729
MALPETITLMDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLVKAEAPFVGTGMEETVARDSGAAIAARRAGVIDQVDASRIVVRATGEVSAEESGVDIYTLMKFQRSNQSTCINQRPLVKVGDVVRAGDIIADGPSTEFGELALGRNALVAFMPWNGYNYEDSILISERIVKDDVFTSIHIDEFEVAARDTKLGPEDITRDIPNVGEEALRNLDEAGIVYIGAEVEPGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTIVDVRVFNRHGIDKDERAMAIEREEIERLKKDSDDERTILNRATWSRLREMLLDQVATAAPKGVRKGVTIDAEVLDSVDRHEWWKFAVQDDKVQGDLETVKAQYDEAAKRITDKFHDRREKLERGDELPPGVLKMVKVFVAVKRKLQPGDKMAGRHGNKGVISRILPQEDMPFLADGTPVDLVLNPLGVPSRMNVGQIFETHLGWAARGLGQQVSQALEDWREANPDARPGAMPEPVKDRLRTIYGEHYLADIDARDGEGIVELAENLTRGVPMGTPVFDGAVEADVADMLELAGLDPSGQSDLFDGRTGEKFDRKVTVGIIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALQAYGAAYTLQEMLTVKSDDVVGRTKVYEAIVKGDDTFEAGIPESFNVLVKEMRSLGLNVDLKSMDEDDGLAEAAE*