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SCNpilot_expt_300_bf_scaffold_5453_7

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(4895..5602)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A426_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 229.0
  • Bit_score: 198
  • Evalue 7.50e-48
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 229.0
  • Bit_score: 198
  • Evalue 2.10e-48
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADH87846.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 229.0
  • Bit_score: 198
  • Evalue 1.00e-47

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Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGCTGAGGTTAATAGATAATGAGCGAGCCGATCCGGCCGCCCCCCGCAGCCAGACCAGCGCCGCTTATTCGGAGATCAAGTCCGGCATTCTGACCGGCCGGATCGGGAGCGGAGAAAAGCTCAAGATCAACGATCTTGCGGCTCAGCTCTCGGTCAGCCCCGGCGCGGTACGCGAGGCATTGTCGCGGCTGGTGCCGGAAGGCTTCGTCATTTCGCGCGACCAGCGCGGCTTCACCGTCGCGCCGCTCTCGATCGAGGATTTGCTCGATCTGACCCGGCTGCGTTGCGACATAGAGGAGATCGCGCTGCGCCGATCGGTTGCGGAAGGCGACCCGGCATGGGAGGCGTCCGTCCTCGCCACCGCGCATCGTCTGCGCCGCACGCCGCGCGTGGTCGATGATGCGCCCAACGTCGACTGGCTCGCCCAGCACGAAGCGTTCCACCGCGCATTGGTGAATGGCGCATCCAGTCCACGGCTGTTGATGCTGAATTCTCAGCTTTACCAGCAACTTGAGCGGTATCGTGTGCTGGCTTGGAGGGCCGATCGCGCGCGCGATGTCGATGCCGAGCATCAGGGACTGGTGGATGCGGCGCTCGATCGTGATGCCGACGCGCTGGTGCGCCAGGCACGCGCGCATTTCGAGAAGACGGCGATATTGATCGTCGACGCCGCGAAAAACGACGACGCGAATCTGGCCGCCGGCTGA
PROTEIN sequence
Length: 236
MLRLIDNERADPAAPRSQTSAAYSEIKSGILTGRIGSGEKLKINDLAAQLSVSPGAVREALSRLVPEGFVISRDQRGFTVAPLSIEDLLDLTRLRCDIEEIALRRSVAEGDPAWEASVLATAHRLRRTPRVVDDAPNVDWLAQHEAFHRALVNGASSPRLLMLNSQLYQQLERYRVLAWRADRARDVDAEHQGLVDAALDRDADALVRQARAHFEKTAILIVDAAKNDDANLAAG*