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SCNpilot_cont_300_bf_scaffold_1216_22

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(21460..21831)

Top 3 Functional Annotations

Value Algorithm Source
Polyamine ABC transporter integral membrane protein n=1 Tax=Mycobacterium phlei RIVM601174 RepID=I0RLQ9_MYCPH similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 105.0
  • Bit_score: 96
  • Evalue 2.80e-17
ABC transporter permease {ECO:0000313|EMBL:KDF02451.1}; TaxID=1440774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS1 similarity UNIPROT
DB: UniProtKB
  • Identity: 44.0
  • Coverage: 109.0
  • Bit_score: 101
  • Evalue 7.00e-19
ABC-type spermidine/putrescine transport system, permease component II similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 105.0
  • Bit_score: 94
  • Evalue 1.70e-17

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Taxonomy

Mycobacterium aromaticivorans → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 372
ATGTCGTCTAGCACGCCTGTCAAGCGGGAAGGGCTGGCGGTACGCGCCATGATCGGGTTTGCGCTCGTCTTCATGTTCGCGCCCGTCCTCACCATGATCGTCTTCTCCTTCAACGATCCCGGCGGACGCTTCAATTACGCGCTGGGCAGCTTCTCGCTGGAGGCCTGGCGCCATCCGTTCGCGGTGCCGCAGCTTGGCGTGGCGATCCGCAACAGCCTTGTGGTGGCTGCGGTTTCGGCGCTGCTGGCTGGGTTGCTCGGCACGCCAGTCGGCTTTGCGCTGGGGCGGCGGAAATTCCTCGGGCGCGGCGCGGTTTCGGGCCTCACCTTCATTCCCCTGGCGACCCCGGGATCCCGCTCCTCAAGACCCTGA
PROTEIN sequence
Length: 124
MSSSTPVKREGLAVRAMIGFALVFMFAPVLTMIVFSFNDPGGRFNYALGSFSLEAWRHPFAVPQLGVAIRNSLVVAAVSALLAGLLGTPVGFALGRRKFLGRGAVSGLTFIPLATPGSRSSRP*