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ACD2_33

Alias: ACD2_937.51741.58

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Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD2_33_1
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(507..806)
DNA (300bp) protein (100aa)
507..806 - (rbs_motif=AAA rbs_spacer=10bp)
hypothetical protein Tax=ACD2
ACD2_33_2
ACD2, Gracilibacteria, Bacteria

Not on your lists

1494..1772
DNA (279bp) protein (93aa)
1494..1772 + (rbs_motif=TAA rbs_spacer=13bp)
hypothetical protein Tax=ACD2
ACD2_33_3
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(2252..4288)
DNA (2037bp) protein (679aa)
prlC; oligopeptidase A (EC:3.4.24.70)
prlC; oligopeptidase A (EC:3.4.24.70)
prlC; oligopeptidase A (EC:3.4.24.70)
Oligopeptidase A n=76 Tax=Enterobacteriaceae RepID=OPDA_SALTY (db=UNIREF evalue=3.0e-95 bit_score=353.0 identity=34.6 coverage=90.1325478645066)
ACD2_33_4
unknown

Not on your lists

4569..4922
DNA (354bp) protein (118aa)
S23 ribosomal protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YW10_9FLAO (db=UNIREF evalue=7.0e-30 bit_score=132.0 identity=59.29 coverage=94.9152542372881)
s23 ribosomal protein
Ribosomal_S23p (db=HMMPfam db_id=PF05635 from=4 to=110 evalue=8.3e-35 interpro_id=IPR008815 interpro_description=23S rRNA-associated protein)
S23 ribosomal protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YW10_9FLAO Tax=ACD2
ACD2_33_5
ACD2, Gracilibacteria, Bacteria

Not on your lists

5273..5977
DNA (705bp) protein (235aa)
5273..5977 + (rbs_motif=TAAAAA rbs_spacer=4bp)
hypothetical protein Tax=ACD2
ACD2_33_6

Not on your lists

5988..6626
DNA (639bp) protein (213aa)
Adenylate kinase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D971_9ACTN (db=UNIREF evalue=1.0e-22 bit_score=109.0 identity=30.0 coverage=94.8356807511737)
adk; adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3] (db=KEGG evalue=1.0e-21 bit_score=105.0 identity=30.99 coverage=93.8967136150235)
ADENYLATE_KINASE (db=PatternScan db_id=PS00113 from=80 to=91 evalue=0.0 interpro_id=IPR000850 interpro_description=Adenylate kinase GO=Molecular Function: ATP binding (GO:0005524), Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process (GO:0006139), Molecular Function: nucleobase, nucleoside, nucleotide kinase activity (GO:0019205))
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=1 to=208 evalue=3.2e-33)
ACD2_33_7

Not on your lists

comp(6857..7258)
DNA (402bp) protein (134aa)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=11 to=32 evalue=NA)
seg (db=Seg db_id=seg from=26 to=38)
DUF559 (db=HMMPfam db_id=PF04480 from=11 to=126 evalue=1.9e-25 interpro_id=IPR007569 interpro_description=Protein of unknown function DUF559)
ACD2_33_8
ACD2, Gracilibacteria, Bacteria

Not on your lists

7539..8231
DNA (693bp) protein (231aa)
7539..8231 + (rbs_motif=TAA rbs_spacer=11bp)
hypothetical protein Tax=ACD2
ACD2_33_9
ACD2, Gracilibacteria, Bacteria

Not on your lists

8247..9305
DNA (1059bp) protein (353aa)
seg (db=Seg db_id=seg from=196 to=210)
seg 196..210 Tax=ACD2
ACD2_33_10
unknown

Not on your lists

9308..10450
DNA (1143bp) protein (381aa)
hypothetical protein
Oxygen-independent coproporphyrinogen III oxidase n=7 Tax=Fusobacterium RepID=C3WWD0_9FUSO (db=UNIREF evalue=3.0e-38 bit_score=162.0 identity=33.01 coverage=73.2283464566929)
seg (db=Seg db_id=seg from=310 to=323)
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=3 to=379 evalue=1.6e-58)
ACD2_33_11
ACD2, Gracilibacteria, Bacteria

Not on your lists

10452..11378
DNA (927bp) protein (309aa)
radical SAM domain-containing protein (db=KEGG evalue=2.0e-09 bit_score=66.6 identity=23.64 coverage=83.1715210355987)
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=20 to=194 evalue=4.1e-17)
Radical_SAM (db=HMMPfam db_id=PF04055 from=35 to=194 evalue=7.1e-10 interpro_id=IPR007197 interpro_description=Radical SAM GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: iron-sulfur cluster binding (GO:0051536))
radical SAM domain-containing protein alias=ACD2_937.51741.58G0011,ACD2_937.51741.58_11,ACD2_C00033G00011 id=35125 tax=ACD2 species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=BD1-5 organism_desc=BD1-5
ACD2_33_12
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(11375..11878)
DNA (504bp) protein (168aa)
type 11 methyltransferase
seg (db=Seg db_id=seg from=74 to=89)
seg (db=Seg db_id=seg from=122 to=133)
transmembrane_regions (db=TMHMM db_id=tmhmm from=67 to=86)
ACD2_33_13
ACD2, Gracilibacteria, Bacteria

Not on your lists

12380..13771
DNA (1392bp) protein (464aa)
coiled-coil (db=Coil db_id=coil from=55 to=90 evalue=NA)
coiled-coil (db=Coil db_id=coil from=343 to=364 evalue=NA)
seg (db=Seg db_id=seg from=57 to=71)
seg (db=Seg db_id=seg from=78 to=89)
ACD2_33_14
unknown

Not on your lists

13856..14647
DNA (792bp) protein (264aa)
Transcriptional regulator, TrmB n=1 Tax=Burkholderia sp. Ch1-1 RepID=D5NS62_9BURK (db=UNIREF evalue=6.0e-09 bit_score=65.1 identity=25.39 coverage=89.7727272727273)
seg (db=Seg db_id=seg from=84 to=96)
seg (db=Seg db_id=seg from=176 to=186)
TrmB (db=HMMPfam db_id=PF01978 from=12 to=77 evalue=9.1e-11 interpro_id=IPR002831 interpro_description=Transcription regulator TrmB, N-terminal)
ACD2_33_15
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(14711..15934)
DNA (1224bp) protein (408aa)
cfa1; cyclopropane-fatty-acyl-phospholipid synthase; K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] (db=KEGG evalue=4.0e-30 bit_score=135.0 identity=32.03 coverage=66.9117647058823)
seg (db=Seg db_id=seg from=358 to=372)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=115 to=406 evalue=2.9e-35)
CMAS (db=HMMPfam db_id=PF02353 from=142 to=393 evalue=1.7e-34 interpro_id=IPR003333 interpro_description=Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase GO=Biological Process: lipid biosynthetic process (GO:0008610))
ACD2_33_16
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(16224..18782)
DNA (2559bp) protein (853aa)
seg (db=Seg db_id=seg from=372 to=385)
seg (db=Seg db_id=seg from=467 to=481)
seg (db=Seg db_id=seg from=677 to=691)
seg (db=Seg db_id=seg from=728 to=740)
ACD2_33_17
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(18886..19020)
DNA (135bp) protein (45aa)
18886..19020 - (rbs_motif=TAAAAA rbs_spacer=10bp)
hypothetical protein Tax=ACD2
ACD2_33_18
unknown

Not on your lists

comp(19049..21298)
DNA (2250bp) protein (750aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J980_9ARCH (db=UNIREF evalue=1.0e-68 bit_score=265.0 identity=37.73 coverage=55.8666666666667)
coiled-coil (db=Coil db_id=coil from=716 to=737 evalue=NA)
seg (db=Seg db_id=seg from=544 to=555)
ACD2_33_19
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(21377..22060)
DNA (684bp) protein (228aa)
seg (db=Seg db_id=seg from=97 to=106)
seg 97..106 Tax=ACD2
ACD2_33_20
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(22122..23084)
DNA (963bp) protein (321aa)
coiled-coil (db=Coil db_id=coil from=46 to=67 evalue=NA)
seg (db=Seg db_id=seg from=41 to=59)
coiled-coil 46..67 Tax=ACD2
ACD2_33_21
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(23097..24272)
DNA (1176bp) protein (392aa)
23097..24272 - (rbs_motif=TAAAAA rbs_spacer=10bp)
hypothetical protein Tax=ACD2
ACD2_33_22
unknown

Not on your lists

comp(24464..25540)
DNA (1077bp) protein (359aa)
metallophosphoesterase
Metallophosphoesterase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAR2_9BACT (db=UNIREF evalue=4.0e-31 bit_score=139.0 identity=29.96 coverage=70.4735376044568)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=58)
ACD2_33_23

Not on your lists

comp(25552..26172)
DNA (621bp) protein (207aa)
rrmJ; ribosomal RNA large subunit methyltransferase J (EC:2.1.1.-)
23S ribosomal RNA methyltransferase (db=HMMPIR db_id=PIRSF005461 from=4 to=206 evalue=3.0e-54 interpro_id=IPR016448 interpro_description=23S ribosomal RNA methyltransferase GO=Biological Process: rRNA processing (GO:0006364), Molecular Function: RNA methyltransferase activity (GO:0008173))
RIBOSOMAL RNA METHYLTRANSFERASE (db=HMMPanther db_id=PTHR10920 from=15 to=203 evalue=1.4e-52 interpro_id=IPR015507 interpro_description=Ribosomal RNA methyltransferase J GO=Molecular Function: methyltransferase activity (GO:0008168), Biological Process: rRNA methylation (GO:0031167))
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=25 to=206 evalue=1.5e-43)
ACD2_33_24
unknown

Not on your lists

26217..26804
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PW58_9BACT (db=UNIREF evalue=9.0e-08 bit_score=60.1 identity=26.9 coverage=82.6530612244898)
seg (db=Seg db_id=seg from=5 to=24)
DHH phosphoesterases (db=superfamily db_id=SSF64182 from=45 to=159 evalue=3.7e-07)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PW58_9BACT Tax=ACD2
ACD2_33_25
ACD2, Gracilibacteria, Bacteria

Not on your lists

26762..26920
DNA (159bp) protein (53aa)
seg (db=Seg db_id=seg from=7 to=19)
seg 7..19 Tax=ACD2
ACD2_33_26
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(27607..28578)
DNA (972bp) protein (324aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
seg (db=Seg db_id=seg from=262 to=280)
seg (db=Seg db_id=seg from=104 to=115)
ACD2_33_27

Not on your lists

28649..30004
DNA (1356bp) protein (452aa)
yebU; rRNA (cytosine-C(5)-)-methyltransferase RsmF
seg (db=Seg db_id=seg from=422 to=434)
NOL1_NOP2_SUN (db=PatternScan db_id=PS01153 from=184 to=195 evalue=0.0 interpro_id=IPR018314 interpro_description=Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: methyltransferase activity (GO:0008168))
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=20 to=291 evalue=1.0e-44)
ACD2_33_28
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(30061..31314)
DNA (1254bp) protein (418aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=17 to=39)
seg (db=Seg db_id=seg from=373 to=384)
transmembrane_regions 17..39 Tax=ACD2
ACD2_33_29
unknown

Not on your lists

comp(31341..32825)
DNA (1485bp) protein (495aa)
membrane protein
hypothetical protein cdiviTM7_00321 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B25AF (db=UNIREF evalue=2.0e-43 bit_score=180.0 identity=29.16 coverage=81.4141414141414)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=411 to=425)
ACD2_33_30

Not on your lists

comp(32925..34031)
DNA (1107bp) protein (369aa)
putative CHAP domain containing protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
seg (db=Seg db_id=seg from=210 to=252)
CHAP (db=HMMPfam db_id=PF05257 from=259 to=366 evalue=6.7e-12 interpro_id=IPR007921 interpro_description=Cysteine, histidine-dependent amidohydrolase/peptidase)
Displaying items 1-30 of 49 in total

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