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SCNpilot_expt_300_bf_scaffold_3718_6

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(4221..4619)

Top 3 Functional Annotations

Value Algorithm Source
succinate dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI0002E46FEB similarity UNIREF
DB: UNIREF100
  • Identity: 74.1
  • Coverage: 135.0
  • Bit_score: 195
  • Evalue 4.70e-47
Succinate dehydrogenase, hydrophobic membrane anchor protein {ECO:0000313|EMBL:EKS34839.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia. similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 129.0
  • Bit_score: 187
  • Evalue 1.40e-44
succinate dehydrogenase hydrophobic membrane anchor protein subunit similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 131.0
  • Bit_score: 180
  • Evalue 2.60e-43

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 399
ATGAGCCAGAACACCCGGCATTCGATGCGCACCGCGCTTGGCCGCGTCCGCTATCTCGGGTCCGCCCATGGCGGCACCTCGGATTTCTTCCGCCAGCGGCTCACCGCCATCGCGCTGGTGGTGCTGTTCACGCCGGTCATCGTCGTGATCATGATGCTGCTCGGCCGCAGCCAGGCCGGCGCGGCGCAGATCCTCGGCTCGCCGGCGGTCGCGATCCTGATGATCCTCTTCATCGTCGCCAGCGTCTGGCACATGAAGATCGGCATGCAGGTGGTGATCGAGGACTATATCAGCGGCGAAAAGACCAAGCTCGCCGCCATCATCGCCAATAATTTCGTCGCGTTCGCGATCGGCCTCGCCTCGATCTACGCGCTCGTCAAACTGTCATCCGGAGTCTAG
PROTEIN sequence
Length: 133
MSQNTRHSMRTALGRVRYLGSAHGGTSDFFRQRLTAIALVVLFTPVIVVIMMLLGRSQAGAAQILGSPAVAILMILFIVASVWHMKIGMQVVIEDYISGEKTKLAAIIANNFVAFAIGLASIYALVKLSSGV*