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SCNpilot_solid_1_scaffold_1_95

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(99461..101890)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein VirB4 n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I2D7_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 809.0
  • Bit_score: 1462
  • Evalue 0.0
ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) similarity KEGG
DB: KEGG
  • Identity: 96.3
  • Coverage: 809.0
  • Bit_score: 1568
  • Evalue 0.0
  • rbh
ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) {ECO:0000313|EMBL:CDM25183.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteob similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 809.0
  • Bit_score: 1568
  • Evalue 0.0

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2430
ATGACCGCAGCCACCGCACTGGCCGTTGATGAACGGCTGGTTTCCCGCTATCTGCCCTATTCCCACCATGTCACCGATCGCATCATTGCCTGCGACAACCATGAATATCTGGCGGTCATCAAGGTGGCCGGGCGGGCGCCCGACGCCTACGACCAGGCTGAACTGAAAGACTGGATCGAGGCCCTACACAATGTGCTGCGCGGTCTGCCCATGGGTTCGCTCGGTCTGTATTCGCACATCATCCGCAGGCGTGTGACGGAATACCCCGACAGCACGTTTGCACAACCTTTCGCCACCCGTTTTGATGCAGCCTACCGGGCGACGTTTGACACCTCGGGGCTGATGGTCAATGACCTGTACCTGAGTGTGCTGATTCATCCCGTCGCAGACCCCGTTCTGGGCACCTTCGCCAGTCTGGAAAAGGGGGATGCAAAACGCCTGGCTCACTGGCAGGACGAATCCATCGAACGCCTGGACAGCGCCTTGCGGGCACTGACCGCAGGCCTGTACCGCTACGATCCGCAGATCCTGGGCATCGTGGATCGCCAAGGGCTGGCATTCAGCGAAACCGCTGAATTCCTGGGGTTCCTGCTGTCTGGCACTCATCGGCCTGTGCCGATCAGCCGGGAACGGCTGCGCGAAACCCTGCCCCAGGCCCGGCCCATCTTTGGCCGCCACGGCGAGTTGGGCGAACTGCGCACCATCGCCGGATCACGCCTCTTTGGCATGATGGAATTGCGCGACTACCCGGAAGCCACCAAACCGGGCCACCTGGACCGGCTGCTGGGCCTGCCCCATGAGTTTGTGCTGACGCAATCCTGGGGCAGCCACACGGGAGCCGCCGCCAAGAAGCTGGTCAAGAAACATCACAAGCTGCTGGTGGACTCGGGCGATGATTCGGTCAGCCAGGTGACGCAACTGGCCGATGTGATGGACGATCTGACATCGGCCCGCCTGGGCCTGGGGGATCACCACGCCACCCTCCTGGTGTATGGCACCTCGGCGGACGGTGTGCGTCAGGCACTGGCGCAGACAGCCACCGCCCTGGCCGAAGACGCCGTGGGCTTTCGGCCCCTGGATCGGGCCTTGGAGGCCGGATTCTGGGCGCAACTGCCGGGCAACTGGCATTGGCGTCCCCGGCCTGTGCCTATGACATCACTGAATTTTCTGTGCTTTTCCAGCCTGCACAATCAGCTGACGGGCAAGCCTGCCGGTAACCCCTGGGGGCCAGCCGTCACGATGCTGAAAACGCAGACGGGATCGCCCTTTTTCTTCAACTTCCATGCCTCCACGGAAGACCTGGATGAAACCGGCAAACGCCGACCGGGCAACACCCTGATCATCGGCATGACCGGCAGCGGCAAAACAGTGCTGCAAGGCATGTTGCTGGCCCAGGCGCAAAAATTCGGGGCCGTGGGCGTGGTCTGGGACAAAGACCAGGGCATGCAGGTACTCATCATGGCGCTGGGTGGGCGGTACTTCAATATCCGCCTGGGGGAGCCGACCGGCTGGAATCCCTTTCAGATGGAACCCACCAAGGGCAATGTCGCCTTCATGGTGCGCCTGGTCATCTACCTGGCCGAACGCCAGGGCGAAGCCGTCACCACCCGGCAGCGGGCCGACATCACCCAGGCGGTCCAGCAGTTGACCACTCTGATTGACCGACCGGCCAGAACGCTGTCCACCCTGAACACCTTGCTGCCCAACCCTTACAGCGAGGACGACACCCGCAGCACCATCCACGCACGCCTGGCCCCCTGGTGCCAGGGGGGTGAATACGGCTGGGTATTCGACAACCCTGCAGACGATCTGAATCTGAAAACGGACAGTGACCAGTCTGCCCTCTTTGGCTTTGATCTGACCGAACTGCTGGACGATGACGATGTGCGCGGCGCGGCCACCCTGTACCTGAAATACCGCGTCGATGCGCTGCACGACGGGCGGCGCATCATCAACCTGTACGACGAGTGCCAGCACCCGTTGAAAGACGCACATTTTCAGGAGTCCATGCAGGACGCGGCCCGCACGATCCGCAAAAAGAACGGCGTGCTGGCCCTGGCGACCCAGGAACCGGGGGCCATCATTGAAAACCCGGTGGGCGCATCCCTGGTGCAGCAAACGGCCACGCTGATCCTCTTGCCCAACCCCAAGGCCCGCGCCCGCGATTACATCGAGGGCTTTGGCCTGACGGTCGCGGAATTTGAACTGCTCCAAAGCCTGGGCGAAGCCAGCCGCAAGTTTCTGGTGAAGCAAGGGGCCAGCGTCACCGTCGCCCAATTGGACCTGTCGGGCTGCGAAGACGAATTGCTGGTGTTCTCCGGCAGCCCCGACATGGCGGACATCGCAGAACAGGCCGTCGCCCAGGCCGGGACCGATCCCGCCGCCTGGTTGCCGGTCTACCTGGCTGCCATCAAACAAGCCCGTCAGTAA
PROTEIN sequence
Length: 810
MTAATALAVDERLVSRYLPYSHHVTDRIIACDNHEYLAVIKVAGRAPDAYDQAELKDWIEALHNVLRGLPMGSLGLYSHIIRRRVTEYPDSTFAQPFATRFDAAYRATFDTSGLMVNDLYLSVLIHPVADPVLGTFASLEKGDAKRLAHWQDESIERLDSALRALTAGLYRYDPQILGIVDRQGLAFSETAEFLGFLLSGTHRPVPISRERLRETLPQARPIFGRHGELGELRTIAGSRLFGMMELRDYPEATKPGHLDRLLGLPHEFVLTQSWGSHTGAAAKKLVKKHHKLLVDSGDDSVSQVTQLADVMDDLTSARLGLGDHHATLLVYGTSADGVRQALAQTATALAEDAVGFRPLDRALEAGFWAQLPGNWHWRPRPVPMTSLNFLCFSSLHNQLTGKPAGNPWGPAVTMLKTQTGSPFFFNFHASTEDLDETGKRRPGNTLIIGMTGSGKTVLQGMLLAQAQKFGAVGVVWDKDQGMQVLIMALGGRYFNIRLGEPTGWNPFQMEPTKGNVAFMVRLVIYLAERQGEAVTTRQRADITQAVQQLTTLIDRPARTLSTLNTLLPNPYSEDDTRSTIHARLAPWCQGGEYGWVFDNPADDLNLKTDSDQSALFGFDLTELLDDDDVRGAATLYLKYRVDALHDGRRIINLYDECQHPLKDAHFQESMQDAARTIRKKNGVLALATQEPGAIIENPVGASLVQQTATLILLPNPKARARDYIEGFGLTVAEFELLQSLGEASRKFLVKQGASVTVAQLDLSGCEDELLVFSGSPDMADIAEQAVAQAGTDPAAWLPVYLAAIKQARQ*