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SCNpilot_solid_1_scaffold_3_145

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(150519..151532)

Top 3 Functional Annotations

Value Algorithm Source
Putative sigma factor regulatory protein n=4 Tax=Bordetella RepID=K0ML63_BORPB similarity UNIREF
DB: UNIREF100
  • Identity: 50.4
  • Coverage: 337.0
  • Bit_score: 341
  • Evalue 1.00e-90
  • rbh
Sigma factor RpoE negative regulatory protein RseB precursor similarity KEGG
DB: KEGG
  • Identity: 68.4
  • Coverage: 332.0
  • Bit_score: 462
  • Evalue 8.60e-128
  • rbh
Sigma factor RpoE negative regulatory protein RseB {ECO:0000313|EMBL:CDM23558.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.; similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 332.0
  • Bit_score: 462
  • Evalue 4.30e-127

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1014
ATGATGACGCAGCGGGGCGGCGCCCGGTCTGCCCGCTGGGCCTGCGGCCTGCTGGCGGGCCTGATGCTGTGCTCGGGCGCCGGGGCTGCCCAGTCCGCGGCTGCGGCCGGCAGCGACGCCCTGGCTTTTTTGCAACAGGTCCAGCAAGCCGCCCGGTCGCTGGATTATTCGGGGATCTACGTCTATCAGCAGGGGCACATTCTGCAGGCGTCCCGGCTGGTGCACCTGGTCGACGGCACCGGCGAACGCGAGCGCCTGGAAGTGCTGGACGGCGCCCCCCGCGAATGCCTGCGCCAGAACGGCGTCGAGCAATGCCTGAGGCCGGACCACAAGGTCGTGATCATCCAACCCGCGCGCAGCGACCATTTCCCGGGCCTGCTGCTGGGCAACGCCCAGGCCATCGCCACGCACTATGAATGGCGCGCCTCGTCCCGCGTCTACCGGATCGCCGGGCGGGAATGCGCGATGTCCGAACTCAAGGCGCGCGACCACCTGCGCTACAGCTATCGCATCTGCACCGACGCCAAGACGCATCTGCTCCTGAAATCCCAGACGCTGGATGCTACCGGACATCTGGTGGACCAGGTCGCGTTCAGCAGCATCCGCGTGGGCGCCGACGTGCAGCCCGCGTCCCTGACGACGCACTGGGACACTCGAAGCTGGCAGCTGATCACGGAATCCAGCGAACCCACGGACCTGCAGGCCCAGGGCTGGCGCTTCACGCTGCCGCCCGGTTTCCAGCCCGTGGCGGAACTCTCGCGCCAGATCGGGCCGGGCCATGCCGTGAACCAGCTCGTGGTTTCCGACGGCCTGGCCGCCATTTCGGTGTTTATTGAAACCTTTGACCCGAAACGCGATCAAAACATCAGACAGGGAGACCTGCGGCAAGGTGCAGTCAACATCTATCGGATGCGTCTGGCGTCCTATTGGTTGACTGCCGTTGGCGAAGCACCCGCCCAGACGGTTCGCGATCTGGCCCGTGCCGTGCAATATGTGCCGCAGGCGGCCCGCTAA
PROTEIN sequence
Length: 338
MMTQRGGARSARWACGLLAGLMLCSGAGAAQSAAAAGSDALAFLQQVQQAARSLDYSGIYVYQQGHILQASRLVHLVDGTGERERLEVLDGAPRECLRQNGVEQCLRPDHKVVIIQPARSDHFPGLLLGNAQAIATHYEWRASSRVYRIAGRECAMSELKARDHLRYSYRICTDAKTHLLLKSQTLDATGHLVDQVAFSSIRVGADVQPASLTTHWDTRSWQLITESSEPTDLQAQGWRFTLPPGFQPVAELSRQIGPGHAVNQLVVSDGLAAISVFIETFDPKRDQNIRQGDLRQGAVNIYRMRLASYWLTAVGEAPAQTVRDLARAVQYVPQAAR*