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SCNpilot_solid_1_scaffold_3_314

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(331102..332619)

Top 3 Functional Annotations

Value Algorithm Source
tricarboxylate transporter n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002F0AC8D similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 490.0
  • Bit_score: 793
  • Evalue 1.50e-226
  • rbh
Tricarboxylate transporter {ECO:0000313|EMBL:KIZ49856.1}; TaxID=47885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas oryz similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 501.0
  • Bit_score: 788
  • Evalue 6.70e-225
tctA1; tricarboxylate transport protein TctA similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 497.0
  • Bit_score: 780
  • Evalue 2.80e-223

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Taxonomy

Pseudomonas oryzihabitans → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1518
ATGGAACAGTTTGATCTGCTCATGCATGGCATGGAGGTGGTGCTGACCTGGAACCACCTGCTGCTGATGGTGGCCGGCGTGCTGCTGGGCATCCTGGTGGGGGTGCTGCCCGGCCTGGGCGCGCCCAACGGCGTCACGCTGCTGCTGCCGCTGACCTTCAGCATGTCGCCGGTGTCGGCCATCATCCTGCTGTCGTGCATGTACTGGGGCGCCCTGTTCGGCGGCTCGGTGACCTCCGTCATCTTCAACATCCCGGGCGAGCCGTCCTCGATCGCGACCACCTTCGACGGCCATCCGCTGGCCAAGCAGGGGCGGGCGGGCGAAGCCCTGACCGCCGCTTACACCTCGGCCCTGCTGGGGGCGCTGGTCGGCGTGCTGCTGCTCACCTTCCTGTCCACCTACATCGCGAACTTCGCGATGGAATTCAGTTCGCCTGAATTCTTCGCCGTGTACGTGCTGGCGTTCGGCAGTTTCATCGGCCTGGGCAAGACGCCCGCCCTGAAGACCGTGGCCGCCATGATGCTGGGCTTCATCCTGGCCAGCGTCGGCATGGATACGGTGTCCGGGAACCTGCGCCTGACCTTCGGGCTGACGGACCTGTTGCGCGGCATCAGCTTCGAGGTCGCCGTGATCGGCCTGTTCGGCATCGGCGAGATCCTGTGCACGGTCGAGGAAGGCCTGGTGTTCCGGGGGGAAAACGCCAAGATCAATTTGCGCGTGGTCTGGAATACCTGGAAGCAGATGCCGCGCTACTGGGCCACCTGGGTGCGCAGCTGCGTGATCGGCTGCTGGATGGGCATCACGCCGGGCGGCCCGACGGCGGCCTCCTTCCTGAGCTACAGCGTGGCCAAGAACATGTCCAGGCACCCCGAGCAGTTCGGCAAGGGCGCGCTGGACGGCGTCATCGCTCCCGAAACGGCCGACCACTCGGCCGGCACCAGCGCCCTGCTGCCCATGCTGACCCTGGGAATCCCCGGTTCGGCGACCGCCGCCGTCATGCTGGGCGGCCTGATGATCTGGGGCCTGCAGCCCGGGCCGACCCTGTTCGTGGAACAGAAGGACTTCGTCTGGGGCCTGATCGCCAGCATGTACCTGGGCAACGTCGTCGGCCTGATCGTGGTGCTGTCCACCATTCCGCTGTTCACCGCCATCCTGCGCATTCCGTTTTCCATCATCGCGCCCATCATCGTCATCATCTGCGCCATCGGCGCCTATGCGGTGAACCAGTCGCTGTTCGACGTCGGGCTGATGTTGGTGTTCGGGGTGTTCGGCTACCTGTTCAAGAAGCTGTCCTACCCCATCGCGCCGCTGGTGCTGGCGGCCGTGCTGGGCGACAAGGCCGAGGACGCCTTCCGCCAGTCCATGCTGTTCTCCCAGGGCAGCCTGGACATCTTCTGGTCCAACGGCCTGGTCGGATCCATGACGACGGCCGGCCTCGTGATGGCCTTCCTGCCGCTGATTTCCAAGGCCGCTCGGGCCGTGATCGGCCGCGGGAAGGCGGCCCGCTCCACCTTTTGA
PROTEIN sequence
Length: 506
MEQFDLLMHGMEVVLTWNHLLLMVAGVLLGILVGVLPGLGAPNGVTLLLPLTFSMSPVSAIILLSCMYWGALFGGSVTSVIFNIPGEPSSIATTFDGHPLAKQGRAGEALTAAYTSALLGALVGVLLLTFLSTYIANFAMEFSSPEFFAVYVLAFGSFIGLGKTPALKTVAAMMLGFILASVGMDTVSGNLRLTFGLTDLLRGISFEVAVIGLFGIGEILCTVEEGLVFRGENAKINLRVVWNTWKQMPRYWATWVRSCVIGCWMGITPGGPTAASFLSYSVAKNMSRHPEQFGKGALDGVIAPETADHSAGTSALLPMLTLGIPGSATAAVMLGGLMIWGLQPGPTLFVEQKDFVWGLIASMYLGNVVGLIVVLSTIPLFTAILRIPFSIIAPIIVIICAIGAYAVNQSLFDVGLMLVFGVFGYLFKKLSYPIAPLVLAAVLGDKAEDAFRQSMLFSQGSLDIFWSNGLVGSMTTAGLVMAFLPLISKAARAVIGRGKAARSTF*