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SCNpilot_solid_1_scaffold_8_145

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(170075..170968)

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide deacetylase family protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X5K4_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 79.1
  • Coverage: 292.0
  • Bit_score: 490
  • Evalue 1.20e-135
  • rbh
polysaccharide deacetylase family protein similarity KEGG
DB: KEGG
  • Identity: 79.1
  • Coverage: 292.0
  • Bit_score: 490
  • Evalue 3.40e-136
  • rbh
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:AGU48187.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 292.0
  • Bit_score: 490
  • Evalue 1.70e-135

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGGAGCATCAGCGGGATTATGTGGGGTATGGCCGTCGGCGGCCGTCGTTTTCCTGGCCCGGGGGAAAGCGGCTGGCGGTCAGCGTCGTCGTAAACTACGAAGAGGGCGGCGAAAGCTGCGTGATGGATGGCGATGCGTTTTCGGAAACGCTGAATAGCGATGTGGTCGGGGCTTCGCCCCGGGCGGGCCGCCGCAATCTGGTGGTCGAGTCCCACTATGAATATGGCAGCCGGGTCGGCCACTGGCGCATTCTGGATCTGCTTGCCGAGTGCGGCATCCCGGCGACGTACTTCGCGGTGTCCAGCGCCCTGGAGAAGAATCCGGAAGCGGCTCGCTCCATCGTCCAGGCCGGGCATGAGGTGGTGTCGCACGGCGCCCGCTGGATCGACTATGACATGGTGGATCAGGAGACGGAGGACGCTCATATCGAGCGATCCCTCGGCGTGATCGAACAGTTGTGCGGAGTGCGCCCGGTCGGCTGGTATACCGGCCGCGTCAGCGCCAATACGCGCGCGCTGGTGCAGAAGCACGGGCTGCTCTATGACTCCGATGCCTACAACGACGATTTGCCGTATTGGGTTCCGGTCAATGGCCGGCCGCATCTGGTGCTGCCCTACAGCTTCGATTGCAACGACATGCGCTTCGCTTCCGCGCCCGGCTTCAATACGCCCGACGATTTCGTCGGCCACTTGCAGCGCACCCTGGATTGCCTGCGCCGCGAGAGCCGGCAGACCCCGAAAATGATGTCCATCGGGCTCCATCTGCGTCTGGCGGGGCGCCCCGGCCGCGCGGATGCGTTGCGCGACTTCCTGTTGCGGGCCGTCGAGCTGGATGACGTATGGTTTTGCCGCCGCAGGGAGATCGCCGATTTCTGGCGGGAGCGGTTCTCTTGA
PROTEIN sequence
Length: 298
MEHQRDYVGYGRRRPSFSWPGGKRLAVSVVVNYEEGGESCVMDGDAFSETLNSDVVGASPRAGRRNLVVESHYEYGSRVGHWRILDLLAECGIPATYFAVSSALEKNPEAARSIVQAGHEVVSHGARWIDYDMVDQETEDAHIERSLGVIEQLCGVRPVGWYTGRVSANTRALVQKHGLLYDSDAYNDDLPYWVPVNGRPHLVLPYSFDCNDMRFASAPGFNTPDDFVGHLQRTLDCLRRESRQTPKMMSIGLHLRLAGRPGRADALRDFLLRAVELDDVWFCRRREIADFWRERFS*