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SCNpilot_solid_1_scaffold_28_146

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(147088..148086)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase alpha subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 95.2
  • Coverage: 332.0
  • Bit_score: 620
  • Evalue 2.40e-175
  • rbh
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059, ECO:0000313|EMBL: similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 332.0
  • Bit_score: 620
  • Evalue 1.20e-174
DNA-directed RNA polymerase subunit alpha n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GX16_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 332.0
  • Bit_score: 543
  • Evalue 1.30e-151
  • rbh

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 999
ATGTCCGCACAAGGTTTTCTCAAGCCCCGCACCATTACCGTGGAATCGCTGGGCGCCAATCACGCCAAGGTCGTCATGGAGCCCTTCGAGCGTGGTTATGGCCACACGCTGGGCAACGCCCTGCGCCGCATCCTGCTGTCTTCCATGACCGGCTACGCGCCGACGGAAGTGCAGATCAGCGGCGTCGTGCATGAATATTCCACGATCGCCGGCGTGCGCGAAGACGTCGTGGACATCCTGCTGAATCTGAAGGGCGTGGTGTTCAAGCTGCACAATCGCGAAGAAGTCACGCTGCAGCTGAACAAGCAGGGCCCGGGCGAGGTCCGCGCGCGCGACATCGAACTGCCGCACGACGTGGAGATCCTCAACCCCGATCACCTGATCGCCACCCTGACCGACAACGGCCGCATCGAAATGCAGCTCAAGGTCGAACAGGGCCGCGGCTACGTGCCGGGCAATGTGCGGGCGCTGGTCGATGACCGTTCGGCCACCATCGGCCAGATCGTGCTGGACGCCTCCTTCAGCCCGGTGCGCCGCGTCAGCTACGCGGTCGAAAGCGCTCGTGTGGAACAGCGTACCGACCTGGACAAGCTGGTGCTGGACGTGCTGACCAACGGCGTCATCAGCCCCGAAGAAGCCGTGCGCCAGTCGGCCCGCATCCTGATGGATCAGGTGTCCGTGTTCGTGTCCCTGGCGGACAAGGACGCCGGCCAGCTGACCACCAGCCTGCCGGTGGGCGGCCAGTCGGCCCCGATCGATCCGGTGCTGCTGCGTCCGGTGGACGATCTGGAATTGACGGTGCGTTCGGCCAATTGCCTGAAGGCCGAAAACATCTACTACATCGGCGATCTGATCCAGCGCACCGAAAATGAGCTGCTGAAGACTCCGAATCTGGGCCGCAAGTCGCTCAACGAGATCAAGGAAGTCCTGGCCGCACGCGGCCTGACCCTGGGCATGAAGCTGGAAAACTGGCCCCCCGTCGGGCTGGAGCGCCCCTAA
PROTEIN sequence
Length: 333
MSAQGFLKPRTITVESLGANHAKVVMEPFERGYGHTLGNALRRILLSSMTGYAPTEVQISGVVHEYSTIAGVREDVVDILLNLKGVVFKLHNREEVTLQLNKQGPGEVRARDIELPHDVEILNPDHLIATLTDNGRIEMQLKVEQGRGYVPGNVRALVDDRSATIGQIVLDASFSPVRRVSYAVESARVEQRTDLDKLVLDVLTNGVISPEEAVRQSARILMDQVSVFVSLADKDAGQLTTSLPVGGQSAPIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEIKEVLAARGLTLGMKLENWPPVGLERP*