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SCNpilot_solid_1_scaffold_31_36

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(36264..36572)

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit alpha n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GU11_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 99.0
  • Bit_score: 168
  • Evalue 3.60e-39
Integration host factor alpha subunit similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 102.0
  • Bit_score: 186
  • Evalue 4.70e-45
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1437824 species="Bacteria; Proteobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 102.0
  • Bit_score: 186
  • Evalue 2.30e-44

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 309
GTGAATACGGATCGGACGCTGACCAAAGCCCATCTGGCCGAACTGCTGTTCGAGCAGGTGGGGCTGAACAAACGCGAAGCCAAGGACGTGGTCGACACGTTCTTTTCCGAGGTCCGCGACGCCCTGGTCCAGGGGGTCGAGGTCAAGTTGTCGGGGTTCGGCAGCTTCCAGGTGCGCAACAAGCCGCCGCGCCCGGGCCGCAACCCGAAGACCGGCGAGGTCATCCCGATTTCCGCCCGTCGGGTCGTCACCTTCCATGCCAGCCAGAAGCTGAAGGATGGCATTGAAATGGCCGGAGGTTCCGCATGA
PROTEIN sequence
Length: 103
VNTDRTLTKAHLAELLFEQVGLNKREAKDVVDTFFSEVRDALVQGVEVKLSGFGSFQVRNKPPRPGRNPKTGEVIPISARRVVTFHASQKLKDGIEMAGGSA*