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SCNpilot_solid_1_scaffold_31_63

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(64817..66778)

Top 3 Functional Annotations

Value Algorithm Source
Exodeoxyribonuclease V alpha chain (EC:3.1.11.5) similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 675.0
  • Bit_score: 765
  • Evalue 1.20e-218
  • rbh
RecBCD enzyme subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01487, ECO:0000313|EMBL:CDM24200.1};; Exonuclease V subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 675.0
  • Bit_score: 765
  • Evalue 6.00e-218
Exodeoxyribonuclease V, alpha subunit n=1 Tax=Thiocapsa marina 5811 RepID=F9UF31_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 49.0
  • Coverage: 706.0
  • Bit_score: 544
  • Evalue 1.50e-151

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1962
ATGAGTGAGCAATCCCCAGCGTGGCCGGCATGGCTTTCCTACGGACAGGCGGAGACCGTCCAGGATCTGGACGTCGCCTTCGGCCGCCTGCTGGCTGAGCAATGCCCGGACGCACCGCAGGTCGCGGTGCGCCTGGCCATGCAGTGCTGCGCCCAATTGGCTCAAGGCCATCCCTGCCTGGACCTGCGGACCCTGGCCGACCGCCTGCCGCTGGCGCCGGACGAGTGCCTGGCGCAGCTGGAGGCGGCCCCCTTCGTCGGCGACGGCGGGGGCGACGAGCCGCTGGTGCTGCATGGCGCCCGCCTGTACCTGGCCCGCTACTGGCGGGCCGGCGAACGCATCCGCCAAGCCATCGCCGGGCGCCTGGGCGCGGCGACGGACGCGCTGGCGGACCCGCCGCTGGCGCGGGAATGGCTGGACCGCCTGTTTCGGCCCGAAGAGAACGCGTCGCTGGATTGGCAGAAGCTGGCCTGCGCGGTGATGCTGGGGCAGCGTTTCGGTCTCATCACGGGCGGGCCGGGCACCGGCAAGACCACGACCGTGGTTCGCCTGCTGGCCGTGCTGCAGGGCCTGGCCCAGGCCCGCGGCCTGGCGCGCGGGCTGCGCATCCGGCTGGCCGCGCCCACGGGCAAGGCGGCCGCCCGCCTCAATGAGTCCATCGCCGGCAAGCTGCAGGACATGGCCGGCAAGGGCGGGCCGGAACTGCGGGCCGCGCTGGACTGCGTGCCGTCCCAGGTGGTGACGCTGCATCGCCTGCTGGGCAGCCGGCCGGGCACCCGGCGCATGAGCCATCATGCCGGCCGTCCACTGGACCTGGACGTGCTGGTGATCGACGAAGCCTCGATGATGGACATCGAGATGGCGGATGCCGTCCTCTCGGCCCTGCCGGCCGCGGCGCAACTGGTGCTGCTGGGGGACAAGGATCAACTGGCCTCGGTCGAGGCCGGCGCGGTGCTGGGGGAACTTTGCGCGCGCGCCGAAGGCGGCCACTACACGCGGGCCACCTGCGAACGCCTGGCGGCTCTGTGCGGCCAGGATCTGATGGCCGCCGCCGAGGACCCGGGACGGTCGGGAGTGGAGGCCGGCGTCCTGCGCTGTCCGGATCCGGACGGCACGCCTCTGGATCAGGCGGTGATCATGCTGCGGCGCAGCATGCGCTTTGGCAAGGAAAGCGGCATCGGCCGTTTCGCCCATGCCGTCAACCGGGGACAGGTCGCGGAGGTCCGCGCCCTGCTGCAGGCGGGGCTGGAAGACCTGGACTGCGTGGCTTCGGCCGATGCGGCGGGGGCGGATGCCTGGCTGCGCGATGCCGGCGTCCTGGCCGATGCCGCCTATCCGGCGATCTTCACCCGGATGCAGACCCATCGGCCCGCCGCGCAGGCGCCGCAGGAGGACTGGGATCGCTGGGCGCTGGATCTGCTGGGCACCCAGGCGCGGTTTCAGGTCCTGTGCGCCGTCCGTCAAGGACCCTGGGGGGTGCAGGGGCTGAATCAGCTCATCGAGTCGCGCCTGCGGTCCGCCGGCCTGATTCCCTCCGGCTCCGGTCCCTGGTATCCGGGGCAGCCCGTGCTGGTGCGCCGCAATCTTCCCGCGCTGGGCCTGGCCAATGGAGACATGGGCCTGGTGTTGTCCGTTCCGGCGCCGGGACGGCCGGAGGGCCGGCTGCGGGCGGCCTTCGCCGGCGCCCGGCAGGGCACGGTGCGCTGGGTGTCTCCCGCCCGCCTCGCGGATGCCGAAACCGCCTACGCCCTGACGGTGCATAAATCCCAGGGGTCGGAGTTCGAGCGCGTGGTGCTGGTCCTGCCGGATCGCCCGGGGCCTCTCGTGACGCGCGAACTGCTCTATACCGGCGCCACCCGCGCGCGGAAGTCGCTGACGCTGGTGCTCCCGCATGACGAGTCCATCGTCCACCATGCCGTCCGGCACCCGACCCGGCGCGCCGGCGGGGTCTGGAATCCCTGA
PROTEIN sequence
Length: 654
MSEQSPAWPAWLSYGQAETVQDLDVAFGRLLAEQCPDAPQVAVRLAMQCCAQLAQGHPCLDLRTLADRLPLAPDECLAQLEAAPFVGDGGGDEPLVLHGARLYLARYWRAGERIRQAIAGRLGAATDALADPPLAREWLDRLFRPEENASLDWQKLACAVMLGQRFGLITGGPGTGKTTTVVRLLAVLQGLAQARGLARGLRIRLAAPTGKAAARLNESIAGKLQDMAGKGGPELRAALDCVPSQVVTLHRLLGSRPGTRRMSHHAGRPLDLDVLVIDEASMMDIEMADAVLSALPAAAQLVLLGDKDQLASVEAGAVLGELCARAEGGHYTRATCERLAALCGQDLMAAAEDPGRSGVEAGVLRCPDPDGTPLDQAVIMLRRSMRFGKESGIGRFAHAVNRGQVAEVRALLQAGLEDLDCVASADAAGADAWLRDAGVLADAAYPAIFTRMQTHRPAAQAPQEDWDRWALDLLGTQARFQVLCAVRQGPWGVQGLNQLIESRLRSAGLIPSGSGPWYPGQPVLVRRNLPALGLANGDMGLVLSVPAPGRPEGRLRAAFAGARQGTVRWVSPARLADAETAYALTVHKSQGSEFERVVLVLPDRPGPLVTRELLYTGATRARKSLTLVLPHDESIVHHAVRHPTRRAGGVWNP*