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SCNpilot_solid_1_scaffold_31_132

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(145867..147501)

Top 3 Functional Annotations

Value Algorithm Source
AMP-binding protein n=1 Tax=Herbaspirillum seropedicae RepID=UPI000304DADF similarity UNIREF
DB: UNIREF100
  • Identity: 64.1
  • Coverage: 541.0
  • Bit_score: 688
  • Evalue 4.20e-195
  • rbh
Medium-chain-fatty-acid CoA ligase {ECO:0000313|EMBL:EIJ46801.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herb similarity UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 536.0
  • Bit_score: 685
  • Evalue 6.60e-194
AMP-binding protein similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 539.0
  • Bit_score: 680
  • Evalue 3.20e-193

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Taxonomy

Herbaspirillum sp. GW103 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1635
ATGACCGCTGATTTTCCGATGGCCGCGTCATCCGCCTATGGCTATCCTCTGCTGATCAGGCAACTCTTTGAATCCGCCCGGGCGAATGCCAGTCCGAACGAAATCGTGCACCAGGGCAGGCGCCTGCGGTATGCCGAATTCTTCGATCGGGTGGTCCGCCTGGCCCGCGCGCTGGCCGACCTGGGCGTGCGCCGGGGCGATGTCGTGGCGGTCATGGACTGGGACAGCCACCGCTATCTGGAAGCCTTTTTCGCCGTGCCCATGATGGGGGCGGTCCTGCAGACCGTCAATGTCCGGCTTTCGCCCGAGCAGATCGCCTACACCCTGAATGACGCGGAAGCGGGCGTCCTGCTGATCCACGACGATTTCATCCCCATCCTGGACGCTATCCAGGGGCGGCTGCGGACGGTGCGGCATCGTCTGTCCCTGACCGACCAGCCGGATGGCGGCCGTCCGGGGGCCGCCGCGGAATACGAGGCCCTGCTGTCGCGGACCGAGCCGGATTTCGAATTTCCCGAACTGGACGAGCAGGCGCGGGCCACCACCTTCTACACCACCGGCACCACCGGCCAGCCCAAAGGCGTGTATTTCAGCCACCGCCAACTGGTCCTGCACACCCTGTCTACGGCGGCGGCGCTGGGCGGCCCCCTGACGCAGGGGCGCCTGCACCGGGAAGACGTCTACATGCCCATGACGCCGATGTTCCACGTCCACGCCTGGGGGTTCCCGTACGTGGCGACGCTGCTGGGGCTGCGGCAGATCTATCCGGGGCGCTATCAGCCCGACGTCCTGCTGCGCCTGATCCGGGATGAGCGCGTCACTTTTTCCCATTCGGTGCCGACCATCCTGCACATGCTGCTGGGCCATGCCGATGCGGCGGACACGGATTTTTCCGCTCTCAAGATGATCATCGGCGGTTCGGCGATGCCCCAGGGGCTGGCCCGGACGGCCCTGGATCGCGGCATCGACGTATTCACGGGCTACGGCATGTCCGAAACCTGCCCGATCCTGACGCTGGCGCAGATGAGGGATCCCGCCGCGGATGCCGGCGCCCGGTTGCGCGATCGCACGCGCACCGGCTATGCGATACCGCTGGTGATGCTGAGGGTCGTCGATGACGAGATGCGGGACGTCGCGCATGACGGCCGCAGCGTCGGGGAAGTCGTGGTGCGCGCGCCCTGGCTGACCCAGGGCTATCTGCGCAATCCGGATGCCTCCGAAGCCCTGTGGCGCGGCGGCTGGCTGCACACGGGGGACATCGGGACGCTGGATGCCCGGGGCATGCTGACGGTCACGGACCGTCTGAAGGACGTCATCAAGACCGGCGGCGAATGGGTGTCTTCCCTGGCCCTGGAAGACGCCGTTTCCCGCCATCCGGCCGTCAGCGAGGTCGCCGTGGTGGGGATGCCCGATGCCCGCTGGGGAGAGCGGCCGCTGGTCCTGGTCGTGCTCCGGCCCGGCCAGGACGCCGATGCGGCGCAGATCCGGGCGCAGGTGCAGGCCGAGGTCGACGCCGGGCGGCTGTCCCGCTATGCCGTGCCCGAGCAGGTGCGCTTCGTGGACAGCCTGCCGCGCACCAGCGTCGGCAAGCTCAACAAGCGCGCCATGCGGGAAAGCCTGTCGGCGGAAAATTGA
PROTEIN sequence
Length: 545
MTADFPMAASSAYGYPLLIRQLFESARANASPNEIVHQGRRLRYAEFFDRVVRLARALADLGVRRGDVVAVMDWDSHRYLEAFFAVPMMGAVLQTVNVRLSPEQIAYTLNDAEAGVLLIHDDFIPILDAIQGRLRTVRHRLSLTDQPDGGRPGAAAEYEALLSRTEPDFEFPELDEQARATTFYTTGTTGQPKGVYFSHRQLVLHTLSTAAALGGPLTQGRLHREDVYMPMTPMFHVHAWGFPYVATLLGLRQIYPGRYQPDVLLRLIRDERVTFSHSVPTILHMLLGHADAADTDFSALKMIIGGSAMPQGLARTALDRGIDVFTGYGMSETCPILTLAQMRDPAADAGARLRDRTRTGYAIPLVMLRVVDDEMRDVAHDGRSVGEVVVRAPWLTQGYLRNPDASEALWRGGWLHTGDIGTLDARGMLTVTDRLKDVIKTGGEWVSSLALEDAVSRHPAVSEVAVVGMPDARWGERPLVLVVLRPGQDADAAQIRAQVQAEVDAGRLSRYAVPEQVRFVDSLPRTSVGKLNKRAMRESLSAEN*