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SCNpilot_solid_1_scaffold_73_30

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(34790..35167)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer TrbC transmembrane protein n=2 Tax=Pseudomonas RepID=I7J238_PSEPS similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 128.0
  • Bit_score: 205
  • Evalue 3.30e-50
trbC; conjugal transfer TrbC transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 128.0
  • Bit_score: 205
  • Evalue 9.20e-51
Conjugal transfer TrbC transmembrane protein {ECO:0000313|EMBL:CDR92710.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomona similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 128.0
  • Bit_score: 205
  • Evalue 4.60e-50

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Taxonomy

Pseudomonas pseudoalcaligenes → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
ATGACGCCTGTTGATGCGTTTCTTATTTCCGTGATTCCGCTTTCTACTATGAACCGTCTGCGCCAGCTGGCCCGGCCTGCCGCGCAAGGGCTGCTGCTAGTCATGCTGTTGATGCTGCTTGCCGGAGCAGCACACGCCGCTGGTTCCTCCATGCCCTGGGAGGGACCACTGCAATCCATTCTGGAGTCTATCCAAGGGCCGGTGGCGCGCATCGTTGCCGTCATCATCATCATTGCCACGGGTCTGGCGCTCGCCTTTGGCGACACCAGTGGCGGTTTTCGCAAGCTGATTCAAATCGTCTTCGGCCTGTCCATCGCGTTCGCTGCATCGTCGTTCTTCTTGTCGTTCTTTTCATTCTCCGGCGGAGCCGTCGTATGA
PROTEIN sequence
Length: 126
MTPVDAFLISVIPLSTMNRLRQLARPAAQGLLLVMLLMLLAGAAHAAGSSMPWEGPLQSILESIQGPVARIVAVIIIIATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGAVV*