name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_solid_2_scaffold_133_118
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(120931..121422)
|
Transcriptional regulator, MarR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V173_9BRAD
Organic hydroperoxide resistance transcriptional regulator {ECO:0000313|EMBL:CEG10160.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" s
transcriptional regulator, MarR family
|
|
SCNpilot_solid_2_scaffold_133_119
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
121578..122012
|
Peroxiredoxin, Ohr subfamily n=1 Tax=Afipia sp. 1NLS2 RepID=D6V172_9BRAD
Peroxiredoxin, Ohr subfamily {ECO:0000313|EMBL:EFI53452.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
OsmC-like protein
|
|
SCNpilot_solid_2_scaffold_133_120
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
122097..123149
|
Alpha/beta hydrolase fold protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V171_9BRAD
rbh
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EFI53451.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" sourc
epoxide hydrolase
|
|
SCNpilot_solid_2_scaffold_133_121
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(123390..124172)
|
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales
sdhB; succinate dehydrogenase iron-sulfur subunit (EC:1.3.99.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1]
rbh
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V170_9BRAD
rbh
|
|
SCNpilot_solid_2_scaffold_133_122
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(124342..126162)
|
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobia
sdhA; succinate dehydrogenase flavoprotein subunit SdhA (EC:1.3.99.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1]
rbh
Succinate dehydrogenase, flavoprotein subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V169_9BRAD
rbh
|
|
SCNpilot_solid_2_scaffold_133_123
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(126166..126573)
|
Succinate dehydrogenase, hydrophobic membrane anchor protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V168_9BRAD
Succinate dehydrogenase, hydrophobic membrane anchor protein {ECO:0000313|EMBL:EFI53448.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.
sdhD; succinate dehydrogenase, membrane anchor SdhD; K00242 succinate dehydrogenase membrane anchor subunit
|
|
SCNpilot_solid_2_scaffold_133_124
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(126570..126965)
|
Succinate dehydrogenase, cytochrome b556 subunit n=1 Tax=Afipia felis ATCC 53690 RepID=K8NVZ0_AFIFE
Succinate dehydrogenase, cytochrome b556 subunit {ECO:0000313|EMBL:EKS30358.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="A
sdhC; succinate dehydrogenase, cytochrome b subunit SdhC; K00241 succinate dehydrogenase cytochrome b556 subunit
|
|
SCNpilot_solid_2_scaffold_133_125
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
127259..127489
|
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V166_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI53446.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
|
|
SCNpilot_solid_2_scaffold_133_126
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(127571..129100)
|
AMP-dependent synthetase and ligase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V165_9BRAD
rbh
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CEG10209.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat
malonyl-CoA synthase
rbh
|
|
SCNpilot_solid_2_scaffold_133_127
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(129191..130387)
|
Major facilitator superfamily MFS_1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V162_9BRAD
rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EFI53442.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NL
MFS transporter protein
rbh
|
|
SCNpilot_solid_2_scaffold_133_128
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
130513..131625
|
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|H
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
rbh
3-isopropylmalate dehydrogenase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V161_9BRAD
rbh
|
|
SCNpilot_solid_2_scaffold_133_129
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(131869..132243)
|
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V160_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG10214.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
|
|
SCNpilot_solid_2_scaffold_133_130
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
132557..133591
|
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:000
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11); K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
rbh
Aspartate-semialdehyde dehydrogenase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V159_9BRAD
rbh
|
|
SCNpilot_solid_2_scaffold_133_131
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(133655..134344)
|
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Af
Carbonic anhydrase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V158_9BRAD
rbh
|
|
SCNpilot_solid_2_scaffold_133_132
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
134460..135353
|
citE; citrate lyase subunit beta (EC:4.1.3.6 4.1.3.34); K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34]
rbh
Citryl-CoA lyase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V157_9BRAD
rbh
(3S)-malyl-CoA thioesterase {ECO:0000313|EMBL:CEG10217.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratc
|
|
SCNpilot_solid_2_scaffold_133_133
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(135423..136028)
|
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate is
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
rbh
3-isopropylmalate dehydratase small subunit n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJ90_AFIFE
rbh
|
|
SCNpilot_solid_2_scaffold_133_134
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
137080..137469
|
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V153_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG10220.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
|
|
SCNpilot_solid_2_scaffold_133_135
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(137555..138967)
|
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i
leuC; isopropylmalate isomerase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
rbh
3-isopropylmalate dehydratase large subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V152_9BRAD
rbh
|
|
SCNpilot_solid_2_scaffold_133_136
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
139105..139515
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJ94_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30372.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
glyoxalase family protein
|
|
SCNpilot_solid_2_scaffold_133_137
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(139587..139976)
|
50S ribosomal protein L19 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NW04_AFIFE
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19
|
|
SCNpilot_solid_2_scaffold_133_138
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(140080..140862)
|
trmD; tRNA (guanine-N(1)-)-methyltransferase TrmD; K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
rbh
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase n=3 Tax=Oligotropha carboxidovorans RepID=F8BGT9_OLICM
rbh
|
|
SCNpilot_solid_2_scaffold_133_139
unknown
|
Not on your lists |
comp(140859..140960)
|
This feature has no annotations |
|
SCNpilot_solid_2_scaffold_133_140
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(141041..141589)
|
Ribosome maturation factor RimM n=1 Tax=Afipia felis ATCC 53690 RepID=K8NSC2_AFIFE
rbh
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; A
rimM; 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM
rbh
|
|
SCNpilot_solid_2_scaffold_133_141
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(141727..142056)
|
30S ribosomal protein S16 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NMN4_AFIFE
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16
|
|
SCNpilot_solid_2_scaffold_133_142
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(142099..143646)
|
Signal recognition particle protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V146_9BRAD
rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizob
ffh; signal recognition particle protein Ffh; K03106 signal recognition particle subunit SRP54
rbh
|
|
SCNpilot_solid_2_scaffold_133_143
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(144595..145290)
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NPP4_AFIFE
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30379.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
immunogenic protein; K09807 hypothetical protein
rbh
|
|
SCNpilot_solid_2_scaffold_133_144
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(145302..145772)
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NSC6_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30380.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
transcription activator, effector binding
|
|
SCNpilot_solid_2_scaffold_133_145
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
146354..147226
|
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
dapF; diaminopimelate epimerase DapF (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7]
rbh
Diaminopimelate epimerase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V142_9BRAD
rbh
|
|
SCNpilot_solid_2_scaffold_133_146
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
147228..148490
|
MiaB-like tRNA modifying enzyme n=1 Tax=Afipia sp. 1NLS2 RepID=D6V141_9BRAD
rbh
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:EFI53421.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;
putative 2-methylthioadenine synthase
rbh
|
|
SCNpilot_solid_2_scaffold_133_147
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(148603..149340)
|
putative RNA pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
rbh
Pseudouridine synthase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V140_9BRAD
rbh
Pseudouridine synthase {ECO:0000313|EMBL:EFI53420.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
|