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SCNpilot_solid_2_scaffold_28_117

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 132344..132583

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S18 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5Y7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 79.0
  • Bit_score: 158
  • Evalue 2.20e-36
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 79.0
  • Bit_score: 158
  • Evalue 3.10e-36
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 similarity KEGG
DB: KEGG
  • Identity: 98.7
  • Coverage: 79.0
  • Bit_score: 155
  • Evalue 5.90e-36

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
ATGGCTGACGCTGGTGCACGCCGTCCGTTCTTCCGCCGCCGCAAGACCTGCCCGTTCACGGGCCCGAATGCGCCGAAGATCGACTTCAAGGATTCCAAGCTGCTGATGCGTTACGTGTCCGAGCGCGGCAAGATCGTGCCGAGCCGCATCACGGCCGTGTCCGCGCTCAAGCAACGCGAACTTGCACGCGCGATCAAGCGCGCGCGATTCCTCGGTCTGCTGCCTTACGTAATCCGCTAA
PROTEIN sequence
Length: 80
MADAGARRPFFRRRKTCPFTGPNAPKIDFKDSKLLMRYVSERGKIVPSRITAVSALKQRELARAIKRARFLGLLPYVIR*