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SCNpilot_solid_2_scaffold_28_207

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 229743..231587

Top 3 Functional Annotations

Value Algorithm Source
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5N9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 614.0
  • Bit_score: 1145
  • Evalue 0.0
  • rbh
Neu5Ac permease {ECO:0000313|EMBL:CEG08391.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease ba similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 614.0
  • Bit_score: 1145
  • Evalue 0.0
TRAP transport system, large permease similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 616.0
  • Bit_score: 1092
  • Evalue 0.0
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1845
ATGGCTGCGATATTTATCGAATACATGGCGCCGATCATGTTCGCGTCGCTGGTGGTGTTTTTGCTGCTCGGCTACCCCGTTGCATTCTCGCTTGCCGCAAACGGCTTGCTGTTCGCCCTGATCGGTATCGAACTCGGCCTGTTCCGCCCCGACTTTCTTCAAGCACTGCCCGAGCGCGTCTACGGCGTGATGAACAATGAAACGCTGCTCGCCATCCCGTTCTTTACCTTCATGGGGCTGATCCTCGAACGGTCAGGCATGGCGGAAGATTTGCTCGAAACCATCGGGCAGCTTTTCGGCAGCGTCCGCGGCGGCATCGCCTATGCAGTGGTGTTCGTTGGCGCCCTGCTTGCCGCCACCACCGGCGTCGTCGCCGCGTCGGTGATCTCGATGGGCCTGATCTCGCTGCCCATCATGTTGCGCTACGGCTACGACCGCAGGGTCGCGACCGGCATCATCGCCGCATCCGGCACGCTTGCGCAAATCATTCCGCCCTCTCTCGTTCTCATCGTGATGGCCGACCAGCTCGGCCGCTCCGTCGGCGACATGTATGAGGGCGCGTTCATCCCCGGCATCGTACTGTCGATCCTGTACGCAACCTACATCTTCCTGCTGACAATCTTCGCGCCAAAGACTGTGCCCGGTCTGCCGCTGGAAGCCCAGACGCTGCGCGACCCCGAGACCGCCCAGCATCGCATGGTTCTGCCGATCGCCGCGCTTGCCGCAGCCGGCGTCGCCTACCTTTTCGCAGTCAAGCTCGGCCTGTTCGACTGGACCGCGCCAGTATTCGACAAGATTTCGAGCAACGCTCAGGTTCGTCACGGCTTCTGGTTCATGATTTTGCTGGCGGTATTTGTCAAACCGCTCGTCGGCATTGTCCGCACCACGACGCTCTCGCTTTTCGTTGTTTTTGTTGGTTCGACGATCCTTGCCCTGATCGCGATGAGCTTTACCAACGTCAAGGCCGGCGCGGATTATGTGGTTCTCACCATGTCGCTGGTGGTCGCAATTTCTTTCGTGGTTGCGGCCATCAACAAGCTCCTCGGCCTGAAGCTGCTCTCGCGGCTTGCCGAACAGGTCGTGTTCGTCATGGTTCCTCCGCTCGGCCTCGTCTTTCTGGTGCTCGGTACGATCTTCATCGGCGTCGCCACGCCGACCGAGGGCGGCGCGATGGGTGCTACCGGCGCGCTGATCCTGGGCGTGATGAAGCGCCGGCTCTCGTTCGACCTGACCCGCCAGGCTGTCGAATCGACCGCAAAGCTCTCTGCTTTCGTGATGTTCATTCTGGTCGGCGCGCGCGTCTTCTCGCTGACCTTCTACGGCGTGGATGGCCACCGCTGGGTCGAGCATCTTCTGGTATCACTGCCGGGCGGCCAGATTGGCTTCCTGCTGTTTGTGAACGCTTTCGTATTCTTCCTCGCTTTCTTCCTCGATTTCTTCGAACTTGCCTTCATCATCATTCCCCTTCTCGGCCCCGTCGCGGAGAAACTGGGGATCGATCTGATCTGGTTCGGCGTCATCCTCGGCGTGAACATGCAGACATCGTTCATGCATCCGCCATTCGGATTTGCGCTGTTCTACCTGCGATCGGTCGCACCAAAGGAGTCCTACCTCGACCGCATCAGCGGCAGACGCATGGAGCCTGTCACGACCGCGCAGATCTACTGGGGCTCGGTGCCTTTCGTGATCATCCAGGTCATCATGGTCTGCCTGGTCATTCTGTTCCCGCAGATGGTGATGCACTACAAAGGAGCAGTCTCCACGGTGGACCCGTCGAAGGTGAACATCGAAATCCCGCAGATCGAGATGCCGCAGCTCGATCTTGGAATACCCAACATCAAATAG
PROTEIN sequence
Length: 615
MAAIFIEYMAPIMFASLVVFLLLGYPVAFSLAANGLLFALIGIELGLFRPDFLQALPERVYGVMNNETLLAIPFFTFMGLILERSGMAEDLLETIGQLFGSVRGGIAYAVVFVGALLAATTGVVAASVISMGLISLPIMLRYGYDRRVATGIIAASGTLAQIIPPSLVLIVMADQLGRSVGDMYEGAFIPGIVLSILYATYIFLLTIFAPKTVPGLPLEAQTLRDPETAQHRMVLPIAALAAAGVAYLFAVKLGLFDWTAPVFDKISSNAQVRHGFWFMILLAVFVKPLVGIVRTTTLSLFVVFVGSTILALIAMSFTNVKAGADYVVLTMSLVVAISFVVAAINKLLGLKLLSRLAEQVVFVMVPPLGLVFLVLGTIFIGVATPTEGGAMGATGALILGVMKRRLSFDLTRQAVESTAKLSAFVMFILVGARVFSLTFYGVDGHRWVEHLLVSLPGGQIGFLLFVNAFVFFLAFFLDFFELAFIIIPLLGPVAEKLGIDLIWFGVILGVNMQTSFMHPPFGFALFYLRSVAPKESYLDRISGRRMEPVTTAQIYWGSVPFVIIQVIMVCLVILFPQMVMHYKGAVSTVDPSKVNIEIPQIEMPQLDLGIPNIK*