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SCNpilot_solid_2_scaffold_28_209

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(232897..233985)

Top 3 Functional Annotations

Value Algorithm Source
Tat (Twin-arginine translocation) pathway signal sequence n=1 Tax=Afipia felis ATCC 53690 RepID=K8NDD5_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 362.0
  • Bit_score: 720
  • Evalue 1.10e-204
  • rbh
Tat (Twin-arginine translocation) pathway signal sequence {ECO:0000313|EMBL:EKS28627.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 362.0
  • Bit_score: 720
  • Evalue 1.60e-204
TRAP transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 362.0
  • Bit_score: 695
  • Evalue 1.20e-197
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1089
ATGAAGCGTCGCGATTTTCTGAAAGTAACGGCTGCAGGCGCAGCGACCGCAGCCGTCGCCTCGCCGGCGATTGCCCAATCGTCGCCTGAGATCAAATGGCGGCTGACATCCAGCTTCCCGAAGTCGCTGGATACGATCTATGGCGCAGCCGAAATCATGGCGAAGCAAGTCGCCGAAATGACCGACAACAAATTTCAGATTCAGGTGTTTGCCGCGGGCGAAGTCGTGCCGGGTCTGCAGGCGCTGGATGCCACCTCAAACGGCACCGTCGAAATGTGCCATACCGCAACTTACTATTACGTCGGCAAGGATCCGACCTTCGCGATTTACGCGACCGTTCCGTTTGGTCTCAATGCGCGCATGCAGAATTCCTGGTGGTACCAGGGTGGCGGCGAGCAGCTCGGCAACGAGTTCTTCAAGAAGCATGGTGTAATCGGACATCCCTGCGGCAACACCGGCACCCAGATGGGCGGCTGGTTCCGCAAGGAGATCAAGACCGTCGCAGATCTCTCCGGCCTGAAGATGCGCATCGGCGGCATCGCGGGTCAGGTGCTGGCGAAGCTCGGCGTCGTGCCGCAGCAGCTCGCGGGCGGCGACATCTATCCGTCGCTGGAAAAGGGCACTATCGATGCGGCCGAGTGGATCGGCCCGTATGACGACGAGAAGCTCGGCTTCAACAAGGTTGCGCCGTTCTACTACTATCCCGGCTTCTGGGAAGGCGGCCTGATGGTCCACTCGCTCACCAACCTCGAGAAGTGGAATTCGCTGCCGAAGGCCTATCAGGCAGTTCTCGCCAACGCGAACGCCAACGCAAACACCTACATGCAGGCCCGTTACGACATGCTCAATCCTGGCGCGCTGAAGCGTCTGGTTGCCGGCGGCACGCAGCTTCGGCCTTTCAGCAATGAAGTGCTTGAAGCCAGCCTCAAGGCAACCAACACCCTCTGGGCTGAAATTTCGGCCAAGAACCCCGATTTCAAGAAATCGATCGAGGCGATGCAGGCCTATCGTAACGACGAGTATCTGTGGTGGCAGGTTGCCGAATATACGTTCGACAGCTTCCAGATCCGTTCGCGTACCCGCGGCTGA
PROTEIN sequence
Length: 363
MKRRDFLKVTAAGAATAAVASPAIAQSSPEIKWRLTSSFPKSLDTIYGAAEIMAKQVAEMTDNKFQIQVFAAGEVVPGLQALDATSNGTVEMCHTATYYYVGKDPTFAIYATVPFGLNARMQNSWWYQGGGEQLGNEFFKKHGVIGHPCGNTGTQMGGWFRKEIKTVADLSGLKMRIGGIAGQVLAKLGVVPQQLAGGDIYPSLEKGTIDAAEWIGPYDDEKLGFNKVAPFYYYPGFWEGGLMVHSLTNLEKWNSLPKAYQAVLANANANANTYMQARYDMLNPGALKRLVAGGTQLRPFSNEVLEASLKATNTLWAEISAKNPDFKKSIEAMQAYRNDEYLWWQVAEYTFDSFQIRSRTRG*