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SCNpilot_solid_2_scaffold_137_161

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(179693..180241)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Afipia RepID=D6V3T1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 182.0
  • Bit_score: 350
  • Evalue 9.10e-94
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53 similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 182.0
  • Bit_score: 350
  • Evalue 1.30e-93
RNA polymerase sigma factor protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 96.7
  • Coverage: 182.0
  • Bit_score: 344
  • Evalue 1.60e-92
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGCCTCTCACAGATTCTCTTCGCGACGAAATCCTTGCATCCGTGCCAAGTCTGCGTGCATTCGCAATTTCCCTGAGCGGAAAGAGTGATCGTGCCGACGATCTGGTGCAAGAAACGCTGTTGCGTGCACTCGCCAATATCGACTCGTTTCAGCCCGGCTCGAATCTGCCTGCCTGGCTATTCACGATTCTGCGCAACCTGTTTCGCTCCGATTACCGCAAGCGACGGCGCGAAGTGGAAGATGCCGAGGGCAGCTACTCCAAGACGCTGAAGTCGCAGCCCGCGCAAAGTTCGCATCTCGAATTTGAGGAGTTTCGTGCTGCGCTCGAAAAACTCCCACAGGACCAGCGCGAGGCCCTTATCCTTGTCGGCGCCTCCGGCTTCTCTTACGAAGATGCGGCTGCGATCTGCGGATGCGCGGTCGGCACCATCAAGAGCCGTGTCAATCGCGCGCGCTCGAAACTCAGCGCCATGCTGTATGTAGATGGCACGGAGGATTTCGGGCCAGACAGCACGGTCCGCGCTGTAATCGGCGGCAGTAGCAGTTAA
PROTEIN sequence
Length: 183
MPLTDSLRDEILASVPSLRAFAISLSGKSDRADDLVQETLLRALANIDSFQPGSNLPAWLFTILRNLFRSDYRKRRREVEDAEGSYSKTLKSQPAQSSHLEFEEFRAALEKLPQDQREALILVGASGFSYEDAAAICGCAVGTIKSRVNRARSKLSAMLYVDGTEDFGPDSTVRAVIGGSSS*