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SCNpilot_solid_2_scaffold_133_34

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 30833..32098

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=883080 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 421.0
  • Bit_score: 812
  • Evalue 2.70e-232
rho; transcription termination factor Rho (EC:3.6.1.-); K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 99.0
  • Coverage: 421.0
  • Bit_score: 811
  • Evalue 1.10e-232
  • rbh
Transcription termination factor Rho n=1 Tax=Afipia felis ATCC 53690 RepID=K8NVI3_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 421.0
  • Bit_score: 812
  • Evalue 2.00e-232
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1266
ATGCGGGAAATGAAACTTCAGGACCTCAAGGCCAAGACGCCGGCCGAGCTTGTCTCGTTTGCCGAAGAACTTGGGGTCGAAAACGCCAGCACTATGCGTAAGCAAGAACTGATGTTTGCTATCCTCAAGCTGCTGGCGAGCCAGGAAACGGACATTATCGGCCAAGGCGTTGTTGAGATTCTCTCGGACGGTTTTGGCTTTCTGCGCTCCTCGGATGCCAACTATTTGCCAGGTCCCGACGATATCTACGTCTCACCCTCACAAATTCGCCGCTTCGGTCTGCGCACCGGAGACACCATTGAGGGCCAGATTCGCTCCCCGAAAGAAGGCGAGCGCTATTTCGCGCTCCTCAAGGTCAACACACTCAATTTCGAAGATCCGGAGAAGTCCAAGCACAAGGTCAATTTCGATAATCTGACGCCGCTATTCCCGGATGAGCGGTTCAAGCTCGAGCTTGATGATCCGACCCGCAAGGATCTGTCGCCGCGTGTGATCGATATCGTCGCGCCGATAGGCAAGGGCCAGCGTGCGTTGATCGTCGCGCCGCCGCGTACCGGCAAGACGGTACTGATGCAAAACATCGCCCACGCCATCACCACCAATCACCCGGAATGCTATCTGATCGTGCTTCTGATCGATGAGCGTCCGGAAGAAGTCACCGACATGCAGCGCTCGGTGAAGGGGGAGGTTGTGTCTTCAACCTTTGACGAACCGGCGGTGCGTCACGTTCAGGTTGCGGAAATGGTGATTGAGAAGGCCAAGCGCCTGGTCGAACATGGTCGCGATGTGGTGATCCTGCTTGACTCCATTACGCGGCTTGGCCGCGCCTACAACACCGTGGTGCCGTCGTCTGGCAAGGTGCTCACTGGTGGTGTCGATGCGAACGCGCTGCAGCGACCAAAGCGCTTCTTCGGCGCGGCGCGCAACATCGAGGAAGGCGGCTCGCTGACCATCATCGCAACCGCGCTGGTCGATACCGGCAGCCGTATGGACGAAGTGATCTTTGAAGAGTTCAAGGGCACGGGCAACTCGGAACTTATTCTCGACCGTAAGGTGTCCGACAAGCGCATCTTCCCGGCAATCGACATCGCGCGCTCCGGAACGCGCAAGGAAGAACTCATCACCGATTCGCAGACGCTCAAGAAAATGTATGTGCTGCGGCGTATCCTCAATCCGATGGGCACGATGGATGCGATCGAGTTCCTGCTCGATAAGCTACGGTCGACTAAGAACAATGCCGAGTTCTTCGATTCGATGAACACCTGA
PROTEIN sequence
Length: 422
MREMKLQDLKAKTPAELVSFAEELGVENASTMRKQELMFAILKLLASQETDIIGQGVVEILSDGFGFLRSSDANYLPGPDDIYVSPSQIRRFGLRTGDTIEGQIRSPKEGERYFALLKVNTLNFEDPEKSKHKVNFDNLTPLFPDERFKLELDDPTRKDLSPRVIDIVAPIGKGQRALIVAPPRTGKTVLMQNIAHAITTNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAVRHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNSELILDRKVSDKRIFPAIDIARSGTRKEELITDSQTLKKMYVLRRILNPMGTMDAIEFLLDKLRSTKNNAEFFDSMNT*