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SCNpilot_solid_2_scaffold_68_106

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(120851..121852)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100 similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 333.0
  • Bit_score: 606
  • Evalue 2.40e-170
mraW; S-adenosyl-methyltransferase MraW (EC:2.1.1.-); K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 333.0
  • Bit_score: 562
  • Evalue 6.70e-158
  • rbh
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2U0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 333.0
  • Bit_score: 606
  • Evalue 1.70e-170
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
ATGAGCACAGCCTCTTCCCGCCATATCTCCGTTCTTGGCCGCGAGGCGGTCGAGTTCCTCGCACCGCGCGCGGGCGGTGTTTACGTCGACGCGACCTTCGGTGCGGGTGGCTACAGCAAACGCATTCTTGAAGTCGCCGGCACCCGGGTCATCGGTATTGACCGCGACCGTACGGCGGTTGCCGAGGCATTCGATCTGGTCGAGCGCGCGGAAGGCCGCCTGACTGTGGTGCAGAACCGGTTTTCAAATCTTGCCGAGGTTTGCGCGGCGGAAGGGGCCTCGCAGGTTGACGGCATCGTGATGGATATCGGCGTGTCGTCGATGCAACTCGACCGCGCGGAGCGGGGCTTCTCATTCCGCCATGACGGGCCGCTCGATATGCGCATGGGGCAAGACGGCGCGAGCGCCGCCGATGTGGTCGCAGTTGCCTCGGAGAAGGACCTCGCCAACATCATCTACATTTTCGGCGAGGAGCGGCACTCCCGCGCCGTCGCGCGCGCCATCGTCAAGGCGCGACAGGACAAGCCGATCGTGACGACGAAGGCGCTGGCAGACATCGTGTCGAGCGTCGTGCGGGCGCGCCCCAACGACATTCACCCCGCCACCCGTACGTTTCAGGCACTGCGGATTTTCGTCAATGAAGAACTCGACGAATTGCAGACCGCGCTGCACGCATCTGAGCAGACGCTCAAGCCGGGCGGCAGGCTGGTCGTGGTGTCGTTCCACTCGCTGGAAGACCGCATCGTCAAGAACTTCCTTGCGGCCCGCTCAAGGCAAAGTGGCCGCTCGCGCCATCTGCCGGAGATGGAACAGATCGCGCCGAGTTTTGAGATCCTGACCAAGCGTCCTGTGGTCGCCAATGATAACGAAACGGCCGCCAATCCGCGAGCGCGTTCCGCCAAGCTGCGCGCGGCGCAGCGCACCGCCAATGCCTCGCACCACGAGGATACCACTTTCGACTGGCCGACGCTGCGCACGGTGATGAAGGGGGGGCGGTCTTGA
PROTEIN sequence
Length: 334
MSTASSRHISVLGREAVEFLAPRAGGVYVDATFGAGGYSKRILEVAGTRVIGIDRDRTAVAEAFDLVERAEGRLTVVQNRFSNLAEVCAAEGASQVDGIVMDIGVSSMQLDRAERGFSFRHDGPLDMRMGQDGASAADVVAVASEKDLANIIYIFGEERHSRAVARAIVKARQDKPIVTTKALADIVSSVVRARPNDIHPATRTFQALRIFVNEELDELQTALHASEQTLKPGGRLVVVSFHSLEDRIVKNFLAARSRQSGRSRHLPEMEQIAPSFEILTKRPVVANDNETAANPRARSAKLRAAQRTANASHHEDTTFDWPTLRTVMKGGRS*