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SCNpilot_expt_500_bf_scaffold_1590_36

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(29179..30390)

Top 3 Functional Annotations

Value Algorithm Source
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 403.0
  • Bit_score: 756
  • Evalue 2.20e-215
tryptophan synthase, beta chain (EC:4.2.1.20) similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 403.0
  • Bit_score: 752
  • Evalue 5.50e-215
  • rbh
Tryptophan synthase beta chain n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W675_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 403.0
  • Bit_score: 756
  • Evalue 1.60e-215
  • rbh

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1212
ATGAGCAAGATTGCGGACTTCAACCTCTACCCCGACGCCCATGGCCGCTTCGGCGAGTATGGCGGCAGCTATGTCGCCGAGACGCTGATGGCGCCGTTGGCCGAGTTGAGCGAGGCTTACGAACGGCTGAGCACCGATCCGGCTTTCCTCGCGGAACTGGATCGCGACCTGCAGCATTACGTCGGCCGGCCCAGCCCGATCTACCACGCCGAACGGCTGTCGCGGCAGGTTGGCGGCGCGCGCATTCTGTTCAAGCGCGAGGACCTCAACCACACCGGCGCGCACAAGATCAACAACACCATCGGCCAGGCGCTGGTGGCGCGGCACATGGGCAAGCAGCGCGTCATCGCGGAAACCGGCGCCGGCCAGCATGGCGTGGCCACGGCCACGGTGGCGGCGCGCTTCGGCATGCGCTGCGTGGTGTACATGGGTGCGGTCGACATCGAGCGGCAGAAGATCAACGTCTACCGCATGAAGCTGCTCGGCGCCGAGGTGGTGCCGGTGACTTCCGGTTCGAAGACGTTGAAGGATGCGTTGAACGAGGCGATGCGCGACTGGGTCACCAACGTGGCCGACACCTTCTACATCATCGGCACCGTGGCCGGTCCGCATCCGTATCCGAAGATGGTGCGCGACTTCAATGCCGTCGTGGGGCGCGAGGCACGCGCGCAGATGCTGGCGCAATACGGCCGCCTGCCCGATGTGCTGACCGCCTGCGTCGGCGGCGGCTCCAATGCCATCGGCCTGTTCCATGCCTTCCTCAACGACGCCGACGTGCGCATCGTCGGCGCCGAGGCGGCAGGCGAGGGGATCGCCACCGGCCATCATGCCGCCTCGCTGGCGGCCGGCCGTCCCGGCGTGCTGCACGGCAACCGCACCTACGTGCTGTGCGACGACAACGGCCAGATCACCGAGACGCATTCGGTCTCCGCCGGCCTCGACTATCCCGGTGTGGGGCCGGAGCATGCCTTCCTGAAGGATGCCGGTCGCGCCGAGTACGTCGGCATCACCGACGACGAGGCGCTGGAGGCGTTCCACCTGCTGGCGCGCACCGAAGGCATCCTGGCCGCCCTGGAATCCAGCCACGCGGTGGCGCAGGCGATCAAGCTGGCGCGCGAGTTGCCCAAAGACGGCATCGTGCTGTGCAACCTGTCCGGCCGCGGCGACAAGGATGTGCATACGATCGCGGCGCGCGAGGGAGTGAGCGTGTAG
PROTEIN sequence
Length: 404
MSKIADFNLYPDAHGRFGEYGGSYVAETLMAPLAELSEAYERLSTDPAFLAELDRDLQHYVGRPSPIYHAERLSRQVGGARILFKREDLNHTGAHKINNTIGQALVARHMGKQRVIAETGAGQHGVATATVAARFGMRCVVYMGAVDIERQKINVYRMKLLGAEVVPVTSGSKTLKDALNEAMRDWVTNVADTFYIIGTVAGPHPYPKMVRDFNAVVGREARAQMLAQYGRLPDVLTACVGGGSNAIGLFHAFLNDADVRIVGAEAAGEGIATGHHAASLAAGRPGVLHGNRTYVLCDDNGQITETHSVSAGLDYPGVGPEHAFLKDAGRAEYVGITDDEALEAFHLLARTEGILAALESSHAVAQAIKLARELPKDGIVLCNLSGRGDKDVHTIAAREGVSV*