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SCNpilot_expt_500_bf_scaffold_4641_6

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(6444..7580)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein IcmF n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0T5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 91.0
  • Coverage: 365.0
  • Bit_score: 657
  • Evalue 7.20e-186
Type VI secretion protein IcmF {ECO:0000313|EMBL:EIL93076.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.0
  • Coverage: 365.0
  • Bit_score: 657
  • Evalue 1.00e-185
hypothetical protein; K11891 type VI secretion system protein ImpL similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 380.0
  • Bit_score: 480
  • Evalue 3.80e-133

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1137
GTGGGCAAGCTTCTTGCGCTGTTCAAATCCCGCCTGTTCATCACCCTCGTCGGCCTGCTGCTGCTGGGTCTGCTGATCTGGTTCGGCGGCCCCTACCTCGGTTTCGGCGAGTCGCATCCGCTGGAAAGCCAGGTCGTGCGGCTGCTGGTGATCCTGGTGATCGTGGTGATCTGGGCGGTGTGGCTGCAGGTGCGGCAGATGCGCGTGCGCGGCAAGGCGCGGCAGATGGCCAGTGACCTCAGCGAGCAGGGTGCGCCGGCGACTGCGGGCATCGACGATCGCGCCGCCAACGAACGCGCGCAATTGCAGGGGCGCTTCCAGGAAGCGGTGGACACCTTGCGCAAGAACCGCAGCGGCGGCACCAACCTGTACGCGCTGCCCTGGTACGTGGTGATCGGCCCGCCGGGTTCGGGCAAGAGCACCCTGCTGCAGAACTCCGGCCTCAACTTCCCGCTGTCGAACAAGTTCGGCAAGGAAGCGATCCGCGGCGTCGGCGGCACCCGCAACTGCGACTGGTGGTTCACCGACGAGGCGGTGTTCCTGGATACCGCCGGACGCTACACCACCCAGGACTCCGACCGCGGCGCGGATGCGTCGGCGTGGACGGAGTTCCTCAACCTGCTGCGCAAGTACCGCAAGCGGCGGCCGATCAACGGCGTGATCGTGGCGATGAGCCTGTCGGACCTGCTCACCCTGGATGAGGCCGGGCGGCAGCAGCACATCATGGCGGTGCGGCAGCGGCTGGACGAGCTGGCCAAGCACCTGCGCATCGGGGTGCCGGCCTACCTGGTGTTCACCAAGTGCGACCTGGTGGCCGGCTTCACCGAGTTCTTCGACGACCTCACGCCGGAGCTGCGCAGCCAGGTCTGGGGCATGTCGTTCCCGGTCGACCAGACCATGGCCGGCACCGCGGCCAAACAGTTCCTGGCGGAGTTCAACCTGCTGCTGGAGCGGCTCAACACGCGCATCCTCGATCGCCTGCATCGCGAGCGCGACCGCCAGCGGCGCGCGGCGATCCTGTCGTTTCCGCAGCAGCTGGGCGCCTTGCGCGAGATCACCCGGCAGTTCGTCGAAGGCGTGTTCACGGCGCGTATTTCACCTCCGGCACGCAGGAAGGCACGCCGATCGACCGCATGA
PROTEIN sequence
Length: 379
VGKLLALFKSRLFITLVGLLLLGLLIWFGGPYLGFGESHPLESQVVRLLVILVIVVIWAVWLQVRQMRVRGKARQMASDLSEQGAPATAGIDDRAANERAQLQGRFQEAVDTLRKNRSGGTNLYALPWYVVIGPPGSGKSTLLQNSGLNFPLSNKFGKEAIRGVGGTRNCDWWFTDEAVFLDTAGRYTTQDSDRGADASAWTEFLNLLRKYRKRRPINGVIVAMSLSDLLTLDEAGRQQHIMAVRQRLDELAKHLRIGVPAYLVFTKCDLVAGFTEFFDDLTPELRSQVWGMSFPVDQTMAGTAAKQFLAEFNLLLERLNTRILDRLHRERDRQRRAAILSFPQQLGALREITRQFVEGVFTARISPPARRKARRSTA*