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SCNpilot_expt_500_bf_scaffold_537

Search features with annotation key words

Displaying items 31-60 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_537_31
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32350..32955)
DNA (606bp) protein (202aa)
Polyhydroxyalkanoate synthesis repressor PhaR n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQB0_AFIFE
Polyhydroxyalkanoate synthesis repressor PhaR {ECO:0000313|EMBL:EKS30609.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
polyhydroxyalkanoate synthesis repressor PhaR-like rbh
SCNpilot_expt_500_bf_scaffold_537_32
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33230..34462
DNA (1233bp) protein (411aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EFI53198.1}; EC=2.3.1.9 {ECO:0000313|EMBL:EFI53198.1};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0G8_9BRAD
SCNpilot_expt_500_bf_scaffold_537_33
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34488..35213
DNA (726bp) protein (242aa)
acetoacetyl-CoA reductase (EC:1.1.1.36); K00023 acetoacetyl-CoA reductase [EC:1.1.1.36] rbh
Acetoacetyl-CoA reductase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P964_9BRAD
Acetoacetyl-CoA reductase {ECO:0000313|EMBL:EKS37329.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_500_bf_scaffold_537_34
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35365..36228
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PG40_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37328.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_537_35
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36234..37748)
DNA (1515bp) protein (505aa)
Amidase {ECO:0000313|EMBL:AEI05131.1}; EC=3.5.1.4 {ECO:0000313|EMBL:AEI05131.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Amidase n=2 Tax=Oligotropha carboxidovorans RepID=B6JA12_OLICO rbh
peptide amidase rbh
SCNpilot_expt_500_bf_scaffold_537_36
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37791..38228)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0G5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI53195.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein; K09705 hypothetical protein
SCNpilot_expt_500_bf_scaffold_537_37
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38228..38995)
DNA (768bp) protein (256aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
gloB; hydroxyacylglutathione hydrolase GloB (EC:3.1.2.6) rbh
Hydroxyacylglutathione hydrolase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P773_9BRAD rbh
SCNpilot_expt_500_bf_scaffold_537_38
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39121..39858
DNA (738bp) protein (246aa)
methyltransferase type 11 n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002F06423 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37325.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_537_39
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39950..40633)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P959_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37324.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_537_40
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41090..41992)
DNA (903bp) protein (301aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" sourc
HemK family modification methylase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-]
Release factor glutamine methyltransferase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQC0_AFIFE rbh
SCNpilot_expt_500_bf_scaffold_537_41
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41989..43065)
DNA (1077bp) protein (359aa)
Peptide chain release factor 1 n=2 Tax=Oligotropha carboxidovorans RepID=RF1_OLICO rbh
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1 rbh
Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_expt_500_bf_scaffold_537_42
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43215..45482)
DNA (2268bp) protein (756aa)
ptsP; phosphoenolpyruvate-protein phosphotransferase PtsP (EC:2.7.3.9); K08484 phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] rbh
peptidase n=1 Tax=Afipia birgiae RepID=UPI0003800637 rbh
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000313|EMBL:EKS37321.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_500_bf_scaffold_537_43
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45778..46311)
DNA (534bp) protein (178aa)
Multiple antibiotic resistance (MarC)-related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0F8_9BRAD
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
antibiotic resistance protein; K05595 multiple antibiotic resistance protein
SCNpilot_expt_500_bf_scaffold_537_44
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46471..47709)
DNA (1239bp) protein (413aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
aspartate kinase (EC:2.7.2.4); K00928 aspartate kinase [EC:2.7.2.4] rbh
Aspartokinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0F7_9BRAD rbh
SCNpilot_expt_500_bf_scaffold_537_45
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47916..48380
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8NYY7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS33684.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_537_46
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48393..49145
DNA (753bp) protein (251aa)
ubiG; 3-demethylubiquinone-9 3-methyltransferase UbiG (EC:2.1.1.64) rbh
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PG31_9BRAD
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiquinone 3-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_500_bf_scaffold_537_47
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49368..50267
DNA (900bp) protein (300aa)
DMT transporter permease n=1 Tax=Afipia birgiae RepID=UPI00031CA7C3 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37317.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_537_48
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50268..50714)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P765_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37316.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K08978 putative membrane protein
SCNpilot_expt_500_bf_scaffold_537_49
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50751..51233)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0F3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI53183.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_537_50
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51230..52114)
DNA (885bp) protein (295aa)
hydrolase Sll0601 (EC:3.5.-.-) rbh
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQD1_AFIFE rbh
N-carbamoyl-D-amino acid hydrolase {ECO:0000313|EMBL:CEG10361.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCNpilot_expt_500_bf_scaffold_537_51
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52117..52386)
DNA (270bp) protein (90aa)
Glutaredoxin 3 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0F1_9BRAD
Glutaredoxin 3 {ECO:0000313|EMBL:EFI53181.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
glutaredoxin; K03676 glutaredoxin 3
SCNpilot_expt_500_bf_scaffold_537_52
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52416..53132)
DNA (717bp) protein (239aa)
amidophosphoribosyltransferase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003796F74
ComF family protein {ECO:0000313|EMBL:EKS37310.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
competence protein F rbh
SCNpilot_expt_500_bf_scaffold_537_53
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53355..54239
DNA (885bp) protein (295aa)
Methyltransferase n=2 Tax=Oligotropha carboxidovorans RepID=B6JAC8_OLICO
methyltransferase
Methyltransferase {ECO:0000313|EMBL:AEI05148.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_expt_500_bf_scaffold_537_54
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54341..54742)
DNA (402bp) protein (134aa)
Mutator MutT protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0E8_9BRAD
CTP pyrophosphohydrolase {ECO:0000313|EMBL:CEG10365.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
NTP pyrophosphohydrolase
SCNpilot_expt_500_bf_scaffold_537_55
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54756..55253)
DNA (498bp) protein (166aa)
Uncharacterized protein n=2 Tax=Rhodopseudomonas palustris RepID=B3QBK2_RHOPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAE26037.1}; Flags: Precursor;; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCNpilot_expt_500_bf_scaffold_537_56
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55250..56485)
DNA (1236bp) protein (412aa)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P440_9BRAD
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
bifunctional ornithine acetyltransferase/N-acetylglutamate synthase rbh
SCNpilot_expt_500_bf_scaffold_537_57
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56759..57661)
DNA (903bp) protein (301aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
PpiC-type peptidyl-prolyl cis-trans isomerase; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0E6_9BRAD rbh
SCNpilot_expt_500_bf_scaffold_537_58
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57691..59697)
DNA (2007bp) protein (669aa)
Uncharacterized protein id=2511409 bin=GWF1_Xanthomonadales_69_6 species=Collinsella aerofaciens genus=Collinsella taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
Tax=RBG_16_Gallionellales_56_9_curated
SCNpilot_expt_500_bf_scaffold_537_59
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59699..60877
DNA (1179bp) protein (393aa)
Protein translocase subunit SecA n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PCH9_9BRAD
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
secA; preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA
SCNpilot_expt_500_bf_scaffold_537_60
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61180..62628)
DNA (1449bp) protein (483aa)
Pollen allergen Poa PIX/Phl PVI n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0E4_9BRAD rbh
Pollen allergen Poa PIX/Phl PVI {ECO:0000313|EMBL:EFI53174.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
Displaying items 31-60 of 94 in total

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