name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_bf_scaffold_537_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..185)
|
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20XI1_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD90155.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
|
|
SCNpilot_expt_500_bf_scaffold_537_2
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(240..506)
|
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6J9Q9_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05096.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_expt_500_bf_scaffold_537_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(546..1025)
|
namA; NADPH dehydrogenase NamA (EC:1.6.99.1)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NSY2_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30585.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
|
|
SCNpilot_expt_500_bf_scaffold_537_4
unknown
|
Not on your lists |
1089..1310
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_537_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1593..2276)
|
Beta-lactamase domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0J4_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:KIZ45574.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hydrolase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_537_6
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2417..2896
|
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000310D6B7
Uncharacterized protein {ECO:0000313|EMBL:KJC51611.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_537_7
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2963..3541)
|
Response regulator protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BI33_OLICM
rbh
response regulator protein; K15012 two-component system, response regulator RegA
rbh
Response regulator protein {ECO:0000313|EMBL:AEI05102.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_expt_500_bf_scaffold_537_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3655..4989)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P986_9BRAD
rbh
|
|
SCNpilot_expt_500_bf_scaffold_537_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5182..6507
|
polyhydroxyalkanoate depolymerase, intracellular; K05973 poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
rbh
Polyhydroxyalkanoate depolymerase, intracellular n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P0U4_9BRAD
rbh
Polyhydroxyalkanoate depolymerase, intracellular {ECO:0000313|EMBL:EKS33270.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
|
|
SCNpilot_expt_500_bf_scaffold_537_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6857..7612
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQ92_AFIFE
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30594.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein; K07043
rbh
|
|
SCNpilot_expt_500_bf_scaffold_537_11
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8237..8644
|
4-carboxymuconolactone decarboxylase; K01607 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
4-carboxymuconolactone decarboxylase n=1 Tax=Rhizobium sp. Pop5 RepID=K0VSQ5_9RHIZ
4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:EJZ17978.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
|
|
SCNpilot_expt_500_bf_scaffold_537_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8725..11022)
|
1A family penicillin-binding protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P983_9BRAD
1A family penicillin-binding protein {ECO:0000313|EMBL:EKS37354.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
penicillin-binding protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_537_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11070..13484)
|
[protein-PII] uridylyltransferase; K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59]
PII uridylyl-transferase n=1 Tax=Afipia birgiae RepID=UPI0002F2E1BE
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|
|
SCNpilot_expt_500_bf_scaffold_537_14
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13436..13825)
|
glnD; PII uridylyl-transferase (EC:2.7.7.59); K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59]
PII uridylyl-transferase n=1 Tax=Afipia birgiae RepID=UPI0002F2E1BE
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
|
|
SCNpilot_expt_500_bf_scaffold_537_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14042..15016
|
Aliphatic sulfonates family ABC transporter, substrate-binding protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P979_9BRAD
rbh
Aliphatic sulfonates family ABC transporter, substrate-binding protein {ECO:0000313|EMBL:EKS37349.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
sulfonate ABC transporter periplasmic binding protein; K15553 sulfonate transport system substrate-binding protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_537_16
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15177..16016
|
ABC transporter permease n=1 Tax=Afipia birgiae RepID=UPI0002E19F4F
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37348.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
aliphatic sulfonates transport permease SsuC; K15554 sulfonate transport system permease protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_537_17
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16000..16800
|
ABC transporter, aliphatic sulfonates import ATP-binding protein (EC:3.6.3.-); K15555 sulfonate transport system ATP-binding protein [EC:3.6.3.-]
rbh
ABC transporter, aliphatic sulfonates import ATP-binding protein {ECO:0000313|EMBL:AEI05111.1}; EC=3.6.3.- {ECO:0000313|EMBL:AEI05111.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
ABC transporter, aliphatic sulfonates import ATP-binding protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JA33_OLICO
rbh
|
|
SCNpilot_expt_500_bf_scaffold_537_18
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16867..17379
|
OsmC family protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JA32_OLICO
rbh
OsmC family protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI05112.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_expt_500_bf_scaffold_537_19
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17395..18189
|
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JA31_OLICO
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI05113.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_expt_500_bf_scaffold_537_20
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18186..20930)
|
DNA mismatch repair protein MutS n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GZK6_9BRAD
rbh
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS
rbh
|
|
SCNpilot_expt_500_bf_scaffold_537_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21060..22172)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PG54_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37343.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
patatin; K07001 NTE family protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_537_22
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22374..22865
|
Fur family transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI000360C949
Uncharacterized protein {ECO:0000313|EMBL:EKS37342.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ferric-uptake regulator; K09823 Fur family transcriptional regulator, zinc uptake regulator
|
|
SCNpilot_expt_500_bf_scaffold_537_23
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23077..24330
|
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1]
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=2 Tax=Bradyrhizobiaceae RepID=F7QGT0_9BRAD
|
|
SCNpilot_expt_500_bf_scaffold_537_24
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24437..26044)
|
Na+/H+ antiporter n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0H7_9BRAD
rbh
Na+/H+ antiporter {ECO:0000313|EMBL:EFI53207.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
Na+/H+ antiporter; K03316 monovalent cation:H+ antiporter, CPA1 family
rbh
|
|
SCNpilot_expt_500_bf_scaffold_537_25
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26064..26792)
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJU6_AFIFE
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30602.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_537_26
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27956..28618
|
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055699};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase (EC:2.4.2.-); K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-]
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NX09_9BRAD
|
|
SCNpilot_expt_500_bf_scaffold_537_27
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28748..28936
|
50S ribosomal protein L32 n=3 Tax=Bradyrhizobiaceae RepID=F7QGS3_9BRAD
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
|
|
SCNpilot_expt_500_bf_scaffold_537_28
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29079..29915
|
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0H2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI53202.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_537_29
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29934..30272)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PG45_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37333.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|
|
SCNpilot_expt_500_bf_scaffold_537_30
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30492..32249
|
Diguanylate cyclase/phosphodiesterase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0H1_9BRAD
rbh
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EFI53201.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
diguanylate cyclase/phosphodiesterase
rbh
|