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SCNpilot_expt_500_bf_scaffold_1386_14

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(12482..13606)

Top 3 Functional Annotations

Value Algorithm Source
ispDF; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein (EC:4.6.1.12) similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 381.0
  • Bit_score: 468
  • Evalue 1.50e-129
  • rbh
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F22422 similarity UNIREF
DB: UNIREF100
  • Identity: 72.4
  • Coverage: 380.0
  • Bit_score: 545
  • Evalue 5.20e-152
  • rbh
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 375.0
  • Bit_score: 566
  • Evalue 3.00e-158

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1125
ATGAAGACCGTCGCCATTCTCGTCGCCGCCGGGAGCGGCACCCGCGCGGGGGGCCGCGTGCCCAAGCAGTTCGCGCCGCTCGCCGGCAAGCCGATGCTCAAGCACGGCTTCGACGCCTTGACGTCGCATCCGGAAGTGGACGCCGTATATGTGGTGATCGGTGCGGGCCAGGAAGAGGCCCTGCGCGCGGCATTGGGCGACGTGCCCTTCGCCATCGGCGGCGCGACCCGGCGCGAGAGCGTGGCCAGCGGGCTCGCGGCGCTGGGGGAGGCCGATCGCGTGCTGATCCACGACGCCGCCCGCCCCTTCCTGCCGCGTGCGGTGATCGACCGGCTGCTGGCGGCGCTGGAGACGCATGACGGCGCGATTCCGGGGCTGCCGGTGGCGGACACGCTCGTCGCCGCGTCCGGAGCGTCGGTTCCGCGCGACGGGCTGGTGCGCGTGCAGACGCCCCAGGCCTTCCGCTATGCCGCCATAGCGCAGGCCCATGTCGCCTGGCCCGGCGACCAGGAAGCGACCGACGATGCGCAGATGCTGCGCGCGCTGGGAATGGACGTTGCAATCGTGGAAGGCAGCCCGATGCTCGAGAAGATCACCCATCCCGCCGATTTCGCCGCGGCCGAGGCACGGCATGGCGCCGCGATGCGCGTGCGGACCGCCACAGGATATGATGTGCACCGCTTCGCCGAGGGCGAGGAACTCTGGCTGGGCGGGGTGCGGGTGCCGCATGCGCGCGGGCTTTCCGGGCACAGCGACGCCGATGTCGCGCTGCACGCGATCACCGACGCGCTGCTCGGCACGATCGGCGCGGGCGATATCGGCATGCACTTCCCGCCCAGCGACCCGCAATGGCGCGGGCAACGCTCGTCGAAGTTCCTCGAACATGCCGCCGCGCTGGTGGCCGCCAAAGGCGGGGTGATCGACTTCATCGACCTGACGATCATCTGCGAGGCACCCAAGATCGGGCCGCACCGGGAAGCGATCCGGGCGAGCATCGCGGGAATATTGGGACTGGAACCCTCCGAAGTGAGCGTGAAGGCGACCACCACCGAGCGGCTGGGCTTCACCGGGCGCGGCGAAGGCATGGCCGCGCAGGCGATCGCCACGGTGCGCGTGCCCGGGTAG
PROTEIN sequence
Length: 375
MKTVAILVAAGSGTRAGGRVPKQFAPLAGKPMLKHGFDALTSHPEVDAVYVVIGAGQEEALRAALGDVPFAIGGATRRESVASGLAALGEADRVLIHDAARPFLPRAVIDRLLAALETHDGAIPGLPVADTLVAASGASVPRDGLVRVQTPQAFRYAAIAQAHVAWPGDQEATDDAQMLRALGMDVAIVEGSPMLEKITHPADFAAAEARHGAAMRVRTATGYDVHRFAEGEELWLGGVRVPHARGLSGHSDADVALHAITDALLGTIGAGDIGMHFPPSDPQWRGQRSSKFLEHAAALVAAKGGVIDFIDLTIICEAPKIGPHREAIRASIAGILGLEPSEVSVKATTTERLGFTGRGEGMAAQAIATVRVPG*