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SCNpilot_expt_500_bf_scaffold_20_30

Organism: SCNPILOT_EXPT_500_BF_STEP10_Flavobacteriia_38_13

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 15 / 38
Location: 25119..26789

Top 3 Functional Annotations

Value Algorithm Source
Probable ABC-type transport system, ATPase and permease components n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GWR0_FLAPJ similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 552.0
  • Bit_score: 749
  • Evalue 2.10e-213
  • rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGD69270.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 551.0
  • Bit_score: 754
  • Evalue 9.00e-215
ABC transporter permease/ATPase similarity KEGG
DB: KEGG
  • Identity: 68.3
  • Coverage: 552.0
  • Bit_score: 749
  • Evalue 6.50e-214
  • rbh

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Taxonomy

Flavobacterium aquatile → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1671
ATGACACCAGCCAAACGATTTTTCAGCCTTTTACGACTCGACAGTAAGGACGTTTCACAGATATTTTTCTATGCCTTGTTTGCAGGGTTTATCAGCTTGTCACTACCGTTGGGCATACAGGCAATTATCAACTTTATACAAAGCGGAAGAGTGAGTGTTTCCTGGATTGTCCTCGTAATTTTTGTTATTGCCGGTGTAGCCCTTGTAGGCATACTGTCATTAATGCAATTGCGAATAACCGAAAATTTACAGCAAAAGATTTTTGTCAGGTCGTCCTTTGAATTTGCCTACAGACTTCCCAAGATCCGTTTTGGAGAAACGCATACTAATGTGTATCCTCCAGAGATAGCCAACAGGTTTTTTGATACCATGTCCATACAAAAAGGTGTTTCAAAACTTCTTATTGACTTCTCGTCCGCCTTGCTGCAAATTGGCTTTGGTATAATACTACTGTCATTATACCATCCATTCTTTATTCTCTTTGGAATACTGCTGATTATATTATTGTACCTTATTTTTAAATTCTCCTACCGGCCGGGTCTGGAGACGAGTTTGAGCGAGTCAAAGTACAAATATAAAGCGGCAGACTGGTTGCAGGAAATTGCCAGGAATACTTCCTCTTTCAGGACAATCCTAAACTTTAACTTTGCGCTGGATAAAAATAATGCATTAGTAGAAGGATATCTTAAGTATCGCGAACAGCACTTTAATATTATCAGGAGGCAGTTCATCCAATTGATTATCTTTAAGATCATCATTACAGCCGGACTCCTTCTGATTGGGGGATTTCTGGTAATCAACCAGCAAATGAATATCGGGCAGTTTGTCGCTGCAGAAATTGTAATCCTCCTTGTGATTAATTCTGTTGAGAAAATTATTATTGGGCTTGAAAGCTTTTATGATGTGCTTACCTCTGTTGAAAAGATTGGCCAGGTATCTGATATGGATCTTGACGATGAAAAATACAGTGATGTCCTTCCGGAAGGAACCGAAATGACTATTGCAGCAGAAAATGTCCGCTTCCATTATCCTGATGCAAAAAAAGACGCACTCAAAAATGTGAATCTTCAGATTTTACCCGGTGAAAAAATATTATTGCAAGGAAATAACGGAGCAGGTAAAACTACATTAATACGAATACTATCCGGTCTGTTACAGCCAACATCAGGTGTGCTATCCATAAATGATGACTCCTTGTTAAAGATTGATCCGGCCTCCTACCGTGCAAGGATTGGATACATTATTCAGGGTGAAACGCCTTTTGAAGGAACTATTCGTGAAAACATTACTTTCAACAATCCTTCAATTACCATGGAAGATTTGCATTGGGCCCTCGATGCGGTACAATTAACCGATTTTGTAAAATCGCTACCAGATGGTCTCGACACCAAAATTTTCCCGGAAGGAAGGCACCTTTCTTCTTCAAACGCCCAAAAAATATTACTTGCCCGGAGTATCGTTCACAGACCATCGATTCTATTTTATGAGGATCCGACAGACCGTATGGATAACGAAGCCACAAAAGCAATCATAAAATTTATTTTTTCAGATAAAAATCCCTGGACCGTAGTGGTTTCTTCTGCCAGTTTACATTGGGAAGAAGGAGCAACAAGGCGCATTACAATGGAAAACGGTAAGATAATTAACGATCAATACTTCACGCCATGCTAA
PROTEIN sequence
Length: 557
MTPAKRFFSLLRLDSKDVSQIFFYALFAGFISLSLPLGIQAIINFIQSGRVSVSWIVLVIFVIAGVALVGILSLMQLRITENLQQKIFVRSSFEFAYRLPKIRFGETHTNVYPPEIANRFFDTMSIQKGVSKLLIDFSSALLQIGFGIILLSLYHPFFILFGILLIILLYLIFKFSYRPGLETSLSESKYKYKAADWLQEIARNTSSFRTILNFNFALDKNNALVEGYLKYREQHFNIIRRQFIQLIIFKIIITAGLLLIGGFLVINQQMNIGQFVAAEIVILLVINSVEKIIIGLESFYDVLTSVEKIGQVSDMDLDDEKYSDVLPEGTEMTIAAENVRFHYPDAKKDALKNVNLQILPGEKILLQGNNGAGKTTLIRILSGLLQPTSGVLSINDDSLLKIDPASYRARIGYIIQGETPFEGTIRENITFNNPSITMEDLHWALDAVQLTDFVKSLPDGLDTKIFPEGRHLSSSNAQKILLARSIVHRPSILFYEDPTDRMDNEATKAIIKFIFSDKNPWTVVVSSASLHWEEGATRRITMENGKIINDQYFTPC*