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SCNpilot_expt_500_bf_scaffold_453_66

Organism: SCNPILOT_EXPT_500_BF_STEP10_Flavobacteriia_38_13

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 15 / 38
Location: comp(71675..73006)

Top 3 Functional Annotations

Value Algorithm Source
Type IV fimbriae expression regulatory protein PilR n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FRR2_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 73.1
  • Coverage: 446.0
  • Bit_score: 641
  • Evalue 4.80e-181
  • rbh
Type IV fimbriae expression regulatory protein PilR {ECO:0000313|EMBL:EIA08202.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 446.0
  • Bit_score: 641
  • Evalue 6.80e-181
two-component response transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 442.0
  • Bit_score: 608
  • Evalue 1.90e-171
  • rbh

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Taxonomy

Flavobacterium frigoris → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1332
ATGCTGAAAAAAGAAAACATATTGATTGTTGATGACAATTATGATATGCTGGAATTGTTACAGCGTAATTTAAAGGCGCAGAATTTCCATACCTATAAGGCTTCTTCGGTAATGGAAGCTATTGATATTCTTAAAGTTGTAGCTATCGATTTATTGATTACAGATTTGCAAATGCCCGGCCTGAACGGAATTGAGCTAATCAAATTTGCCGAAGAACATTTTCCTGAAATTCCTAAACTGGTTATTACCGGATTTCCTTCGGTTGATACGGCTGTTAATGCTGTAAAATCCGGTGCTTTGGATTATCTCGTAAAACCATTTACCAGTGAAGAATTAAAAAAGGCGGTACAGAATTCGTTTGAAGGAAAAATAGGTTCAAAGAAAAAAAGCTCTCCTACTCTTCCCGATTCTGACAAAAAGATAACAAACTATGCCGGAATTGTTGGTGATTCCGAACAATTTGAAAATTTAGTTGACGTTATTGAACGCGTCAAAAACAATAAAGCTACCGTTTTAATTCAGGGCGAAAGCGGTACCGGAAAAGAACTGATTGCCAGAGCCATTCATTTTAAAGGCTCATTTGCATCAAACCCTTTTGTAGCTGTGAATTGTGGCGGAATTCCTGAAAACCTGATGGAATCGGAATTATTTGGTTATGAAAAGGGCGCCTTTACAGGTGCCAATGAAAGCAAGATTGGTTTATTCCAGGCAGCAAACGGCGGAACAATCTTTTTGGACGAGATTGGCACGGCACCATTAGCTGTACAAACCAGACTGTTGAGGGTTTTACAGGAAAAGGAAGTCACAAGAATAGGCTCACAAAAAGCCCACAAAATAGATGTCAGGGTCATTTCTGCCACCAATAATGACTTATACGAAATGGTACAAAAAGGAAGCTTTCGCGAAGATTTGTATTACAGGTTAAATGTAGTAAGCATTGAAACGAAACCTTTGAGAGAAAGAAAGAACGACATCCGTCCTTTAATTACTACCTTTATAAAAAAATACGGCATTGAATACGGAAAACCGAATTGTACGATTTCTGACAAGGCAATAGAAATCCTGCTAAGACATTCGTGGCCGGGAAATGTGAGAGAATTAGAAAACATTATACAGAGAATGATAATTATGTGTGATTACGCAATCGATATAGTTGACATTCCTGATTATTTGAAATACCAACAACCTACCGAAGGAGAAACCCTAAAGCCCTTAAAAGATATTGAAAAAGACCACATACTAAAAGTACTGCATGCTGTTGGCGACAATAAAACCAAAGCAGCAGAAATTCTACAGATAGACAGAAAAACATTAAGGCAAAAACTGCTTTAA
PROTEIN sequence
Length: 444
MLKKENILIVDDNYDMLELLQRNLKAQNFHTYKASSVMEAIDILKVVAIDLLITDLQMPGLNGIELIKFAEEHFPEIPKLVITGFPSVDTAVNAVKSGALDYLVKPFTSEELKKAVQNSFEGKIGSKKKSSPTLPDSDKKITNYAGIVGDSEQFENLVDVIERVKNNKATVLIQGESGTGKELIARAIHFKGSFASNPFVAVNCGGIPENLMESELFGYEKGAFTGANESKIGLFQAANGGTIFLDEIGTAPLAVQTRLLRVLQEKEVTRIGSQKAHKIDVRVISATNNDLYEMVQKGSFREDLYYRLNVVSIETKPLRERKNDIRPLITTFIKKYGIEYGKPNCTISDKAIEILLRHSWPGNVRELENIIQRMIIMCDYAIDIVDIPDYLKYQQPTEGETLKPLKDIEKDHILKVLHAVGDNKTKAAEILQIDRKTLRQKLL*