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SCNpilot_cont_1000_p_scaffold_532_16

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 15856..17337

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQL5_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 491.0
  • Bit_score: 781
  • Evalue 4.30e-223
  • rbh
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 491.0
  • Bit_score: 781
  • Evalue 6.10e-223
sigma-54 (RpoN); K03092 RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 493.0
  • Bit_score: 710
  • Evalue 3.90e-202
  • rbh

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1482
ATGCTTATGAAACCTACTCTCCAGTTTAAGCTGACGCAGCACTTGACGCTTACTCCGCAGCTGCAAGAGTCGATCCGGTTGCTGCAACTCTCGACGGTCGAGCTGGGCCAGGAAATCGAGCGGATAGTCCAGGAAAATCCGCTTTTGGAGCTGGAGGATGTTTCCGGTGGGGAGAGCGCCGAATATCGGAGCTCGCCGCTCGACGATCAGACCGAGTCGCTTTCCTCTGCATTACCTGAAATCCAGGATGATGCCGAGGCAAAGATGCTTGCTGGTGGCGTTGATGCAGAAGCCAAGAATAGCCTGACAGATGAGCAGGACTGGTTCAACGACGAAGGGGCCGCGCGCAACTACCGGGATGATGATGAGGAGCGTGAGTATCCGCAGCAGGCGGCGGAACCGCCTAATTTGCGCGAACACCTTCTCTCGCAACTCAGTCTCAGCCAGATTCCGGAACGAGATCGCAGAATAGTCGGATTGCTGATCGACAGCCTGAATGACGACGGATACCTCGTGCAGGATCTGGAAGAGCTCGCGGGCCTGCTGCCGCCAGAGCTCGGAATAGGCATCGACGACTTGCGCATCGCGCTCGAATACCTGCAACATCTGGATCCGCCCGGTATAGGAGCCCGCAACCTGAAGGAATGCCTGATCATGCAGCTGCGTGTTCTGCCGGAAGACACGCCCTATCGGGATCAGGCGCTGCTTCTGGTGAACAAACATCTCGAAAGCCTGGCATCCAGGGATTTCTGCACCATCAAGAAGTTGCTGCATTGCGATGATGAGTGCCTGCGTTCCATCCAGCAGATGATCGTCCGGCTGAATCCGCGGCCGGGCACGGCCTTCAGTTCTGCGGTGGCGCGCTACATCATCCCGGACGTGATTGTCACGAAGGTCAGCGGTAACTGGACAGCGAGCCTCAATCCGGAAGCCATGCCGCGGCTGAAGATCAACCGGCTTTATGCTGATATCCTGAAACGGAGCCACGATGACTCGGCCCGCAGGCTATCCGGGCAATTGCACGAGGCGAAATGGCTGATCAAGAATGTGCATCAGCGCTTCTCCACTATCCTCAAGGTTTCTGCAGCGGTGGTTGAGCGCCAGCGGCAATTCTTTGATCACGGAGCAGTGGCGATGCGTCCCATGGTGCTGCGGGAAATCGCGGACTCTCTTGATCTGCATGAATCCACAATATCGCGTGTGACGACGCAGAAATTCATGCACACGCCGCGCGGCATATTCGAATTGAAGTATTTTTTCAGCAGCCATGTGGGGACGGATACCGGCGGCGCGTGTTCCGCCACGGCAATCAGAGCCCTGATCAAGCAGATGATCAGTTCGGAGAATTCCAAAAAACCGCTGAGCGATACCAAGATCTCTGAAATTCTGGCGCAGCAGGGCATTGTGGTTGCCCGCAGGACTGTCGCAAAATACCGGGAATCCATTCAGATTCCTCCCGTCAATCTTCGTAAATCTTTTTAA
PROTEIN sequence
Length: 494
MLMKPTLQFKLTQHLTLTPQLQESIRLLQLSTVELGQEIERIVQENPLLELEDVSGGESAEYRSSPLDDQTESLSSALPEIQDDAEAKMLAGGVDAEAKNSLTDEQDWFNDEGAARNYRDDDEEREYPQQAAEPPNLREHLLSQLSLSQIPERDRRIVGLLIDSLNDDGYLVQDLEELAGLLPPELGIGIDDLRIALEYLQHLDPPGIGARNLKECLIMQLRVLPEDTPYRDQALLLVNKHLESLASRDFCTIKKLLHCDDECLRSIQQMIVRLNPRPGTAFSSAVARYIIPDVIVTKVSGNWTASLNPEAMPRLKINRLYADILKRSHDDSARRLSGQLHEAKWLIKNVHQRFSTILKVSAAVVERQRQFFDHGAVAMRPMVLREIADSLDLHESTISRVTTQKFMHTPRGIFELKYFFSSHVGTDTGGACSATAIRALIKQMISSENSKKPLSDTKISEILAQQGIVVARRTVAKYRESIQIPPVNLRKSF*