Alias: AMDSBA1_C24
| name | lists | location/seqs | functional annotations | notes |
|---|---|---|---|---|
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AMDSBA1_25_1
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria
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Not on your lists |
comp(248..736)
----------------- DNA (489bp) protein (163aa) |
mutT/nudix family protein n=1 Tax=Bacillus sp. m3-13 RepID=UPI0001E89E61 (db=UNIREF evalue=6.2e-37 bit_score=159.5 identity=51.4 coverage=90.1840490797546)
NUDIX_BOX (db=PatternScan db_id=PS00893 from=51 to=72 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
no description (db=Gene3D db_id=G3DSA:3.90.79.10 from=9 to=144 evalue=1.2e-25 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
Nudix (db=superfamily db_id=SSF55811 from=4 to=152 evalue=2.7e-25 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
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AMDSBA1_25_2
unknown
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Not on your lists |
1180..1452
----------------- DNA (273bp) protein (91aa) |
1180..1452 + ( gc_cont=0.498)
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AMDSBA1_25_3
unknown
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Not on your lists |
comp(1327..1623)
----------------- DNA (297bp) protein (99aa) |
seg (db=Seg db_id=seg from=14 to=25)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
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AMDSBA1_25_4
unknown
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Not on your lists |
comp(1786..2115)
----------------- DNA (330bp) protein (110aa) |
transmembrane_regions (db=TMHMM db_id=tmhmm from=27 to=46)
transmembrane_regions (db=TMHMM db_id=tmhmm from=56 to=78)
seg (db=Seg db_id=seg from=29 to=43)
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AMDSBA1_25_5
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria
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Not on your lists |
comp(2333..3193)
----------------- DNA (861bp) protein (287aa) |
sugar ABC transporter permease
Inner membrane component of binding-protein-dependent transport system n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WQD4_9RHIZ (db=UNIREF evalue=1.0e-34 bit_score=152.9 identity=33.2 coverage=90.94076655052264)
transmembrane_regions (db=TMHMM db_id=tmhmm from=106 to=128)
transmembrane_regions (db=TMHMM db_id=tmhmm from=71 to=93)
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AMDSBA1_25_6
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria
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Not on your lists |
comp(3242..4225)
----------------- DNA (984bp) protein (328aa) |
binding-protein-dependent transporters inner membrane component
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thermotoga lettingae TMO RepID=A8F6K3_THELT (db=UNIREF evalue=5.4e-40 bit_score=170.6 identity=34.6 coverage=87.1951219512195)
seg (db=Seg db_id=seg from=299 to=311)
seg (db=Seg db_id=seg from=265 to=273)
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AMDSBA1_25_7
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria
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Not on your lists |
comp(4237..5571)
----------------- DNA (1335bp) protein (445aa) |
extracellular solute-binding protein
Glycerol-3-phosphate ABC transporter n=7 Tax=Lactobacillus crispatus RepID=D5GXN7_LACCS (db=UNIREF evalue=9.9e-21 bit_score=107.1 identity=24.3 coverage=94.6067415730337)
seg (db=Seg db_id=seg from=17 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
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AMDSBA1_25_8
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(6279..7409)
----------------- DNA (1131bp) protein (377aa) |
arsM; arsenite S-adenosylmethyltransferase
Protein-L-isoaspartate(D-aspartate) O-methyltransferase:UbiE/COQ5 methyltransferase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CV95_9ARCH (db=UNIREF evalue=3.7e-45 bit_score=188.0 identity=40.8 coverage=64.72148541114059)
ARSENITE METHYLTRANSFERASE (db=HMMPanther db_id=PTHR10108:SF11 from=180 to=338 evalue=6.3e-54)
METHYLTRANSFERASE (db=HMMPanther db_id=PTHR10108 from=180 to=338 evalue=6.3e-54)
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AMDSBA1_25_9
Oceanobacillus picturae, Oceanobacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(7460..7810)
----------------- DNA (351bp) protein (117aa) |
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=2 to=97 evalue=1.5e-17)
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=5 to=94 evalue=2.1e-13 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
no description (db=HMMSmart db_id=SM00418 from=5 to=93 evalue=1.4e-08 interpro_id=IPR001845 interpro_description=HTH ArsR-type DNA-binding domain GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
(db=HMMPfam db_id=PF01022 from=39 to=71 evalue=5.3e-08 interpro_id=IPR001845 interpro_description=HTH ArsR-type DNA-binding domain GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
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AMDSBA1_25_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(8503..9906)
----------------- DNA (1404bp) protein (468aa) |
general substrate transporter
general substrate transporter
General substrate transporter n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YF37_METS5 (db=UNIREF evalue=7.2e-147 bit_score=526.2 identity=59.3 coverage=95.94017094017094)
transmembrane_regions (db=TMHMM db_id=tmhmm from=415 to=437)
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AMDSBA1_25_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(10229..11110)
----------------- DNA (882bp) protein (294aa) |
metallophosphoesterase
Metallophosphoesterase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2I1_ACIFD (db=UNIREF evalue=1.0e-45 bit_score=189.5 identity=38.0 coverage=96.93877551020408)
Metallo-dependent phosphatases (db=superfamily db_id=SSF56300 from=3 to=229 evalue=3.7e-27)
(db=HMMPfam db_id=PF00149 from=4 to=204 evalue=6.5e-06 interpro_id=IPR004843 interpro_description=Metallophosphoesterase domain GO=Molecular Function: hydrolase activity (GO:0016787))
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AMDSBA1_25_12
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
11832..12560
----------------- DNA (729bp) protein (243aa) |
haloacid dehalogenase domain-containing protein hydrolase
Putative HAD-hydrolase n=1 Tax=Actinoplanes sp. SE50/110 RepID=G8S4H5_ACTS5 (db=UNIREF evalue=5.6e-18 bit_score=97.1 identity=30.9 coverage=85.18518518518519)
HAD-like (db=superfamily db_id=SSF56784 from=1 to=226 evalue=4.9e-32 interpro_id=IPR023214 interpro_description=HAD-like domain)
(db=HMMPfam db_id=PF00702 from=4 to=178 evalue=1.6e-17 interpro_id=IPR005834 interpro_description=Haloacid dehalogenase-like hydrolase GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
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AMDSBA1_25_13
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(12650..13837)
----------------- DNA (1188bp) protein (396aa) |
Amidohydrolase family, putative n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R3L3_9RHOB (db=UNIREF evalue=4.4e-36 bit_score=157.9 identity=31.3 coverage=84.0909090909091)
Composite domain of metallo-dependent hydrolases (db=superfamily db_id=SSF51338 from=1 to=393 evalue=2.0e-17 interpro_id=IPR011059 interpro_description=Metal-dependent hydrolase, composite domain GO=Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds (GO:0016810))
Metallo-dependent hydrolases (db=superfamily db_id=SSF51556 from=60 to=354 evalue=1.4e-14)
(db=HMMPfam db_id=PF01979 from=320 to=367 evalue=1.5e-09 interpro_id=IPR006680 interpro_description=Amidohydrolase 1 GO=Molecular Function: hydrolase activity (GO:0016787))
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AMDSBA1_25_14
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria
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Not on your lists |
comp(13834..14541)
----------------- DNA (708bp) protein (236aa) |
ABC transporter-like protein
ABC transporter related n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VSB3_MARMS (db=UNIREF evalue=4.3e-15 bit_score=87.4 identity=31.8 coverage=84.7457627118644)
seg (db=Seg db_id=seg from=114 to=132)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=2 to=216 evalue=1.2e-63)
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AMDSBA1_25_15
Bacillus nealsonii, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(14567..15382)
----------------- DNA (816bp) protein (272aa) |
Alkylphosphonate utilization protein PhnK n=5 Tax=Firmicutes RepID=E2SK78_9FIRM (db=UNIREF evalue=7.3e-91 bit_score=339.3 identity=60.4 coverage=99.26470588235294)
ABC-type phosphonate transport system, ATPase component
ABC-type phosphonate transport system, ATPase component
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=2 to=270 evalue=8.2e-73)
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AMDSBA1_25_16
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(15409..16257)
----------------- DNA (849bp) protein (283aa) |
phosphonate metabolism PhnJ
phosphonate metabolism PhnJ
Protein phnJ n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YH27_9BURK (db=UNIREF evalue=6.2e-69 bit_score=266.5 identity=52.4 coverage=81.2720848056537)
Carbon-phosphorus lyase, PhnJ subunit (db=HMMPIR db_id=PIRSF011468 from=1 to=282 evalue=1.6e-178 interpro_id=IPR010306 interpro_description=Phosphonate metabolism PhnJ GO=Biological Process: alkylphosphonate transport (GO:0042916))
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AMDSBA1_25_17
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(16254..17369)
----------------- DNA (1116bp) protein (372aa) |
phosphonate metabolism protein
phosphonate metabolism protein
Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WT55_9DELT (db=UNIREF evalue=2.1e-72 bit_score=278.5 identity=44.9 coverage=95.96774193548387)
seg (db=Seg db_id=seg from=177 to=188)
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AMDSBA1_25_18
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(17374..18030)
----------------- DNA (657bp) protein (219aa) |
phosphonate C-P lyase system protein PhnH
Phosphonate C-P lyase system protein PhnH n=1 Tax=Kyrpidia tusciae DSM 2912 RepID=D5WWE9_BACT2 (db=UNIREF evalue=1.9e-17 bit_score=95.1 identity=33.6 coverage=89.04109589041096)
seg (db=Seg db_id=seg from=35 to=49)
seg (db=Seg db_id=seg from=65 to=87)
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AMDSBA1_25_19
Paenibacillus terrae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(18014..18451)
----------------- DNA (438bp) protein (146aa) |
hypothetical protein
Putative uncharacterized protein n=1 Tax=Paenibacillus terrae HPL-003 RepID=G7VPR4_PAETH (db=UNIREF evalue=4.7e-28 bit_score=129.8 identity=48.9 coverage=95.2054794520548)
(db=HMMPfam db_id=PF06754 from=2 to=137 evalue=7.6e-14 interpro_id=IPR009609 interpro_description=Phosphonate metabolism PhnG GO=Biological Process: phosphonate transport (GO:0015716), Biological Process: phosphonate metabolic process (GO:0019634))
Uncharacterized protein n=1 Tax=Paenibacillus terrae (strain HPL-003) RepID=G7VPR4_PAETH
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AMDSBA1_25_20
unknown
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Not on your lists |
comp(18609..18854)
----------------- DNA (246bp) protein (82aa) |
18609..18854 - ( gc_cont=0.593)
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AMDSBA1_25_21
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria
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Not on your lists |
comp(19252..20475)
----------------- DNA (1224bp) protein (408aa) |
transmembrane_regions (db=TMHMM db_id=tmhmm from=131 to=153)
transmembrane_regions (db=TMHMM db_id=tmhmm from=19 to=41)
HAD-like (db=superfamily db_id=SSF56784 from=325 to=400 evalue=6.1e-17 interpro_id=IPR023214 interpro_description=HAD-like domain)
HALOACID DEHALOGENASE-LIKE HYDROLASE (db=HMMPanther db_id=PTHR12725 from=328 to=387 evalue=7.4e-12)
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AMDSBA1_25_22
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(20475..21158)
----------------- DNA (684bp) protein (228aa) |
two component transcriptional regulator, winged helix family
Putative two-component system response regulator n=1 Tax=Patulibacter sp. I11 RepID=H0E1C0_9ACTN (db=UNIREF evalue=1.4e-31 bit_score=142.1 identity=37.1 coverage=96.05263157894737)
seg (db=Seg db_id=seg from=109 to=127)
TWO-COMPONENT SYSTEM SENSOR HISTIDINE KINASE/RESPONSE REGULATOR (INTESTINAL BACTERIA - BACTEROIDES THETAIOTAOMICRON) (db=HMMPanther db_id=PTHR23283:SF21 from=5 to=121 evalue=2.5e-24)
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AMDSBA1_25_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
22103..23542
----------------- DNA (1440bp) protein (480aa) |
major facilitator superfamily protein
High-affinity inorganic phosphate (Pi) transporter and low-affinity manganese transporter n=2 Tax=Komagataella pastoris RepID=C4R3N5_PICPG (db=UNIREF evalue=2.6e-27 bit_score=129.0 identity=37.0 coverage=40.416666666666664)
transmembrane_regions (db=TMHMM db_id=tmhmm from=360 to=382)
transmembrane_regions (db=TMHMM db_id=tmhmm from=184 to=203)
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AMDSBA1_25_24
unknown
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Not on your lists |
23642..23941
----------------- DNA (300bp) protein (100aa) |
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=51)
transmembrane_regions (db=TMHMM db_id=tmhmm from=61 to=83)
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AMDSBA1_25_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
25215..25553
----------------- DNA (339bp) protein (113aa) |
transposase IS4 family protein
Transposase IS4 family protein n=1 Tax=Sulfobacillus acidophilus TPY RepID=F8I8C4_SULAT (db=UNIREF evalue=7.1e-24 bit_score=115.5 identity=67.8 coverage=63.716814159292035)
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AMDSBA1_25_26
Pontibacillus yanchengensis, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(25576..26163)
----------------- DNA (588bp) protein (196aa) |
broad-specificity phosphatase PhoE (EC:3.1.3.-)
Broad-specificity phosphatase PhoE n=2 Tax=Bacillus cereus RepID=C2Z8Q0_BACCE (db=UNIREF evalue=5.7e-45 bit_score=186.4 identity=49.2 coverage=95.40816326530613)
PG_MUTASE (db=PatternScan db_id=PS00175 from=7 to=16 evalue=0.0 interpro_id=IPR001345 interpro_description=Phosphoglycerate/bisphosphoglycerate mutase, active site GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
Phosphoglycerate mutase-like (db=superfamily db_id=SSF53254 from=1 to=191 evalue=3.7e-48)
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AMDSBA1_25_27
unknown
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Not on your lists |
26646..27086
----------------- DNA (441bp) protein (147aa) |
seg (db=Seg db_id=seg from=127 to=145)
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AMDSBA1_25_28
Bacillus bataviensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(27039..27770)
----------------- DNA (732bp) protein (244aa) |
phosphonate metabolism protein
Phosphonate metabolim protein, transferase hexapeptide repeat family n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SK80_9FIRM (db=UNIREF evalue=5.8e-39 bit_score=166.8 identity=41.4 coverage=80.32786885245902)
seg (db=Seg db_id=seg from=143 to=160)
HEXAPEP_TRANSFERASES (db=PatternScan db_id=PS00101 from=135 to=163 evalue=0.0 interpro_id=IPR018357 interpro_description=Hexapeptide transferase, conserved site GO=Molecular Function: transferase activity (GO:0016740))
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AMDSBA1_25_29
unknown
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Not on your lists |
comp(27809..28363)
----------------- DNA (555bp) protein (185aa) |
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=2 to=62 evalue=2.7e-06 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
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AMDSBA1_25_30
Bacillus mycoides, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(29005..29823)
----------------- DNA (819bp) protein (273aa) |
ABC transporter, permease component n=1 Tax=Desulfosporosinus sp. OT RepID=G2FYT2_9FIRM (db=UNIREF evalue=1.5e-14 bit_score=85.9 identity=23.8 coverage=90.47619047619048)
seg (db=Seg db_id=seg from=163 to=178)
transmembrane_regions (db=TMHMM db_id=tmhmm from=243 to=265)
transmembrane_regions (db=TMHMM db_id=tmhmm from=199 to=221)
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