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AMDSBA1_37_8

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(7460..7948)

Top 3 Functional Annotations

Value Algorithm Source
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=4 to=141 evalue=1.8e-27) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.80e-27
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=34 to=107 evalue=2.4e-12 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.40e-12
(db=HMMPfam db_id=PF01047 from=34 to=91 evalue=2.4e-10 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.40e-10

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Taxonomy

Leifsonia aquatica → Leifsonia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGGCAAGCATGGACATAACCGATGAACTGGTCATGGCGATTGACGAATTGTTTCGCAATCAGCGAAAGCATTACCGGACAATCACCCAAAATCTCTCCATCAGCAGAGCGGAAACGCAAACACTGATGATGCTGTCCCGCAACGCCCCCGTAACCATGACCGAGTTGGCAGATGCGCTGCGCGTTGGACGTTCAGCCATATCGCGCATTGTTCAGCGACTGACGGATCTGAATTTGGTGGTGCGAAAGGCAGCAACTTCCGATCAACGGCGGCACGTCGTGACCTTGTCTCTTAAGGGCAAAAATTTGGCCGAAAAGGTGCGTGCTCAGCGCCTGGCAGTGCTGGGGTCGTGGCTTTCCAAACTGCCTGCGGGAGATCAAGCCCAGCTCTTGAGAATTCTCCACGAATTAAATGCCATGGCCTTCGAAGAGCGGGAAACCGGTTCAGCCAACTCCGATCTGCCGAACCCTGCTCTTCCTCAGAAGTAG
PROTEIN sequence
Length: 163
MASMDITDELVMAIDELFRNQRKHYRTITQNLSISRAETQTLMMLSRNAPVTMTELADALRVGRSAISRIVQRLTDLNLVVRKAATSDQRRHVVTLSLKGKNLAEKVRAQRLAVLGSWLSKLPAGDQAQLLRILHELNAMAFEERETGSANSDLPNPALPQK*