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AMDSBA1_57_17 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=18 to=177 evalue=2.6e-27 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 iprscan interpro
DB: HMMTigr
null null null 2.60e-27 paeh:H70357_02060
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=3 to=113 evalue=1.8e-11 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma facto iprscan interpro
DB: superfamily
null null null 1.80e-11 paeh:H70357_02060
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=109 to=179 evalue=2.0e-11 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct iprscan interpro
DB: superfamily
null null null 2.00e-11 paeh:H70357_02060
(db=HMMPfam db_id=PF04542 from=23 to=91 evalue=6.7e-10 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
null null null 6.70e-10 paeh:H70357_02060
(db=HMMPfam db_id=PF08281 from=121 to=173 evalue=1.1e-08 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
null null null 1.10e-08 paeh:H70357_02060
no description (db=Gene3D db_id=G3DSA:1.10.1740.10 from=7 to=97 evalue=1.2e-06) iprscan interpro
DB: Gene3D
null null null 1.20e-06 paeh:H70357_02060
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8DEL4_9BACL similarity UNIREF
DB: UNIREF90
42.5 null 130 6.30e-28 paeh:H70357_02060
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:EMT51857.1}; TaxID=1300222 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus UNIPROT
DB: UniProtKB
42.4 177.0 129 4.80e-27 M8DEL4_9BACL
hypothetical protein KEGG
DB: KEGG
38.9 162.0 110 4.70e-22 paeh:H70357_02060