ggKbase home page

AMDSBA4_8_26

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: 29230..29949

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 203.0
  • Bit_score: 157
  • Evalue 4.20e-36
Transcriptional regulator, GntR family protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QZB8_9RHOB (db=UNIREF evalue=2.0e-15 bit_score=88.6 identity=27.6 coverage=79.58333333333333) similarity UNIREF
DB: UNIREF
  • Identity: 27.6
  • Coverage: 79.58
  • Bit_score: 88
  • Evalue 2.00e-15
(db=HMMPfam db_id=PF07729 from=100 to=223 evalue=3.9e-19 interpro_id=IPR011711 interpro_description=GntR, C-terminal) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.90e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Conexibacter woesei → Conexibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 720
TTGTGTGTCGTGGCCGAAGAGACTATATCAGGGTCATACAATACTCTCCAATGGCAAGGCGAATCACGGAAGCCGCCCACACTGGCGGAACACGCGACTCAGCAGCTCCGGGAAGCGATTATAAGTGGCGCGCTTGCGCCTGGAGAAACACTCCTATTGAACGATTTAGCCAAGAAACTAGATATTAGCATTATGCCTGTTCGGGAGGCACTCAAGAGGTTGCAATACGAGGGACTGGTGGAACAACCCCCGCAAAAAGAGGCGCGGGTAGCCCCTTTATCACTTGCGGATCTAGATGACACCTATGCGGCGCGAATACTTATGGAAACTCGTGCGATCCGCCGCTCCGCATCCCGATTTAGCGAAGAGGATTATACGAGACTTCTAAAGGTCCTCGAGCAATACGAATTTGCCTACGATCATAACGAAGATGCCATGGGCCGTGCACTGCACAAACGCTTTCATTTTGGGATGTATCAAGTAGGAGCATCCCCGTGGCTACTAGGGCTAATTAGTACCCTTTGGGATAACTCGGAACGTTATCGGCGGCTTTCCCTAGAGCATCGAGGTTCCATTCATGATCGCCGCAACGAGCACGCAGATGTCTTGGAAGCATGCCACGCTCGCGACCCAGAAAAGGCAGCCAGGTTATTGGAAAGCCATCTCCGTAAGACCGCGGAGTTGGTGTATCAATCAGCCGCAAGCGCTTTAGAACAATAA
PROTEIN sequence
Length: 240
LCVVAEETISGSYNTLQWQGESRKPPTLAEHATQQLREAIISGALAPGETLLLNDLAKKLDISIMPVREALKRLQYEGLVEQPPQKEARVAPLSLADLDDTYAARILMETRAIRRSASRFSEEDYTRLLKVLEQYEFAYDHNEDAMGRALHKRFHFGMYQVGASPWLLGLISTLWDNSERYRRLSLEHRGSIHDRRNEHADVLEACHARDPEKAARLLESHLRKTAELVYQSAASALEQ*