ggKbase home page

AMDSBA4_8_26 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
GntR family transcriptional regulator similarity KEGG
DB: KEGG
43.8 203.0 157 4.20e-36 cwo:Cwoe_3891
Transcriptional regulator, GntR family protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QZB8_9RHOB (db=UNIREF evalue=2.0e-15 bit_score=88.6 identity=27.6 coverage=79.58333333333333) similarity UNIREF
DB: UNIREF
27.6 79.58 88 2.00e-15 cwo:Cwoe_3891
(db=HMMPfam db_id=PF07729 from=100 to=223 evalue=3.9e-19 interpro_id=IPR011711 interpro_description=GntR, C-terminal) iprscan interpro
DB: HMMPfam
null null null 3.90e-19 cwo:Cwoe_3891
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=25 to=97 evalue=5.9e-16) iprscan interpro
DB: superfamily
null null null 5.90e-16 cwo:Cwoe_3891
(db=HMMPfam db_id=PF00392 from=28 to=86 evalue=1.2e-15 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 1.20e-15 cwo:Cwoe_3891
no description (db=HMMSmart db_id=SM00895 from=100 to=224 evalue=1.2e-12 interpro_id=IPR011711 interpro_description=GntR, C-terminal) iprscan interpro
DB: HMMSmart
null null null 1.20e-12 cwo:Cwoe_3891
no description (db=HMMSmart db_id=SM00345 from=32 to=90 evalue=6.4e-11 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
null null null 6.40e-11 cwo:Cwoe_3891
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=21 to=93 evalue=3.0e-08 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
null null null 3.00e-08 cwo:Cwoe_3891
HTH_GNTR (db=ProfileScan db_id=PS50949 from=26 to=93 evalue=16.282 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
null null null 1.63e+01 cwo:Cwoe_3891
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADB52308.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="C UNIPROT
DB: UniProtKB
43.8 203.0 157 2.10e-35 D3F3E3_CONWI