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SCNpilot_expt_500_bf_scaffold_5554_11

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(9680..11137)

Top 3 Functional Annotations

Value Algorithm Source
MATE efflux family protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFS0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 453.0
  • Bit_score: 879
  • Evalue 1.50e-252
  • rbh
MATE efflux family protein {ECO:0000313|EMBL:ENY82563.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 453.0
  • Bit_score: 879
  • Evalue 2.10e-252
MATE efflux family protein similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 448.0
  • Bit_score: 538
  • Evalue 2.00e-150

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1458
GTGAGCGAAGACGCGTCCGTTACGCCGGTAGCCGCCGCTGCCGACCCTGCCGCCGCGCCGGTTCCGCCGCGCCAGACCGCGCGTGGCGCCGGACGCATGAACCTGACCGAAGGGCCGATCGCGAAGACGCTGATCCTCTTCGCCTTGCCGACGCTCGCATCGAACGTGCTGCAGACGCTGTCGGGGTCGATCAATTCGGTGTGGGTCGGCCAGTTCCTCGGCGGCAGCGCGCTCGCCGCGACCGCCAATGCGAACATCATCATGTTCCTGATGTTCGCGACCTTCTTCGGCTTCGGAATGGCCGCGACGGTGCTGATCGGCCAGGCGATCGGGCGCGGCGATACCGACGCGGCGCGCCGCGCCACCGGCGCTGTCGTCGGCCTCGCGCTGATCTTCTCGCTCGTCATCGCCGTCGTCGGCTGGTTCGCCTCGACCACCATCCTGCATTGGCTCAAGACCCCGCCCGAAGCCTTTGACCTTGCGCATGATTATCTGCGCGTGACCTTCATCGCGATCCCGGCGAGCATGCTGGCGGTGACGCTGATGATGGCGTCGCGCGGCGCCGGCGACGCGGTGACGCCGCTGCGCTTCATGCTGCTGTCGGTCGTCCTTGACATCGCGCTCAACCCGCTGCTGATCCTCGGCATCGGCCCCTTCCCGCGCCTCGGCATCGCCGGCAGCGCGCTCGCGACGGCGATTGCCGGAACGATCAGCCTGATCGCGATGCTCGGCTGGTTCTATGCCCGCGACCATGTGCTGCGGCTGCGCGGACCCGAACTCAAATATCTCCTCCCCAATATGGAGGAACTGCGCTTCATCATCGGCAAGGGGCTGCCGATGGGCGCACAGATGCTCGTCATTTCGGGCGCCGGGCTGGTGATGGTCGGGCTGGTCAATCGCGAAGGGCTCGTCACCGCCGCTGCCTATGGCGCGACGCTGCAATTGTGGAACTATGTCCAGATGCCCGCGCTCGCGGTCGGCGCGGCGGTCAGCGCCATGGTCGCGCAGAATATCGGCGCTGCAAAGTGGAACCGCGTCACCACCATCACCAACAGCGGCATCGCGATCAACCTGATGATGACCGGGGTGCTGATCGCGCTGCTGCTCCTTTTCGACCGCGCTGCGCTCGCCCTCTTCCTTGGCAGCGACACCGCGGCGATCGATGCCGCGCGCCATATCCAGTTGCTCGCGACCTGGACCTTCCTGCCCTTCGGCACGACGATCGTGCTGATCGGAACGCTCCGCGCCAACGGATCGGTCGTGCCACCGCTCGTCATCCTGTTCCTGTCGATGTTCCCGATCCGCCTCGGCATCTATTATCTGGGTTACCCGGCGCTCGGCGGCGATGCGATCTGGTGGAGCTTTCCGCTGTCCTCGTTCGCGTCGCTGACGATGGCGTGGATCGTCTATCGCCGCGGCAACTGGCGCCGTACGCTGCCGCAACCCCGCGTCGCCTGA
PROTEIN sequence
Length: 486
VSEDASVTPVAAAADPAAAPVPPRQTARGAGRMNLTEGPIAKTLILFALPTLASNVLQTLSGSINSVWVGQFLGGSALAATANANIIMFLMFATFFGFGMAATVLIGQAIGRGDTDAARRATGAVVGLALIFSLVIAVVGWFASTTILHWLKTPPEAFDLAHDYLRVTFIAIPASMLAVTLMMASRGAGDAVTPLRFMLLSVVLDIALNPLLILGIGPFPRLGIAGSALATAIAGTISLIAMLGWFYARDHVLRLRGPELKYLLPNMEELRFIIGKGLPMGAQMLVISGAGLVMVGLVNREGLVTAAAYGATLQLWNYVQMPALAVGAAVSAMVAQNIGAAKWNRVTTITNSGIAINLMMTGVLIALLLLFDRAALALFLGSDTAAIDAARHIQLLATWTFLPFGTTIVLIGTLRANGSVVPPLVILFLSMFPIRLGIYYLGYPALGGDAIWWSFPLSSFASLTMAWIVYRRGNWRRTLPQPRVA*