name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_bf_scaffold_339_1
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
72..743
|
Resolvase, N terminal domain protein n=1 Tax=Xanthomonas citri pv. mangiferaeindicae LMG 941 RepID=H8FM55_XANCI
Resolvase, N terminal domain protein {ECO:0000313|EMBL:CCG39442.1}; TaxID=1156940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. mangiferaeindicae LMG 941.;"
putative resolvase (resP)
|
|
SCNpilot_expt_500_bf_scaffold_339_2
uncultured bacterium, Bacteria
|
Not on your lists |
736..1113
|
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=Q91UT7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CAC79150.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
|
|
SCNpilot_expt_500_bf_scaffold_339_3
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1277..1528
|
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VVL4_POLNA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM39692.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
|
|
SCNpilot_expt_500_bf_scaffold_339_4
unknown
|
Not on your lists |
1532..1984
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_339_5
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2064..3095
|
Replication initiator protein A n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GGY9_ALIDK
Replication initiator protein A
Uncharacterized protein {ECO:0000313|EMBL:EGY61119.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
|
|
SCNpilot_expt_500_bf_scaffold_339_6
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4120..5259)
|
ParB-like partition protein n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XER3_METSD
parB-like partition protein
ParB-like partition protein {ECO:0000313|EMBL:ACT52120.1}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
|
|
SCNpilot_expt_500_bf_scaffold_339_7
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5309..6061)
|
Cobyrinic acid ac-diamide synthase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1C2_HALNC
Uncharacterized protein {ECO:0000313|EMBL:KHD17772.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
cobyrinic acid ac-diamide synthase; K03496 chromosome partitioning protein
|
|
SCNpilot_expt_500_bf_scaffold_339_8
unknown
|
Not on your lists |
comp(6009..6398)
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_339_9
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6443..7777)
|
Conjugation TrbI family protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1C0_HALNC
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10
Conjugation TrbI family protein {ECO:0000313|EMBL:ACX96493.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
|
|
SCNpilot_expt_500_bf_scaffold_339_10
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7783..8874)
|
P-type conjugative transfer protein TrbG n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1B9_HALNC
P-type conjugative transfer protein TrbG; K03204 type IV secretion system protein VirB9
P-type conjugative transfer protein TrbG {ECO:0000313|EMBL:ACX96492.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
|
|
SCNpilot_expt_500_bf_scaffold_339_11
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8892..9605)
|
Conjugal transfer protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1B8_HALNC
Conjugal transfer protein; K03200 type IV secretion system protein VirB5
Conjugal transfer protein {ECO:0000313|EMBL:ACX96491.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
|
|
SCNpilot_expt_500_bf_scaffold_339_12
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10708..11433)
|
TrbL/VirB6 plasmid conjugal transfer protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TJ64_ACIAC
TrbL/VirB6 plasmid conjugal transfer protein; K07344 type IV secretion system protein TrbL
TrbL/VirB6 plasmid conjugal transfer protein {ECO:0000313|EMBL:ABM31002.1}; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
|
|
SCNpilot_expt_500_bf_scaffold_339_13
unknown
|
Not on your lists |
comp(11430..11768)
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_339_14
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11768..12520)
|
P-type conjugative transfer protein TrbJ n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L171_HALNC
Uncharacterized protein {ECO:0000313|EMBL:KGG84775.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
P-type conjugative transfer protein TrbJ
|
|
SCNpilot_expt_500_bf_scaffold_339_15
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12560..15019)
|
CagE, TrbE, VirB component of type IV transporter system, conserved region n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L172_HALNC
rbh
type IV transporter system CagE/TrbE/VirB; K03199 type IV secretion system protein VirB4
rbh
CagE, TrbE, VirB component of type IV transporter system, conserved region {ECO:0000313|EMBL:ACX96445.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
|
|
SCNpilot_expt_500_bf_scaffold_339_16
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15021..15332)
|
conjugal transfer protein TrbD n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003765F3F
Conjugal transfer protein TrbD 1 {ECO:0000313|EMBL:AIC29729.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
trbD; conjugal transfer protein TrbD; K03198 type IV secretion system protein VirB3
|
|
SCNpilot_expt_500_bf_scaffold_339_17
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15336..15674)
|
Conjugal transfer protein TrbC n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L174_HALNC
Conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2
Conjugal transfer protein TrbC {ECO:0000313|EMBL:ACX96447.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
|
|
SCNpilot_expt_500_bf_scaffold_339_18
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15661..16710)
|
P-type conjugative transfer ATPase TrbB n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L177_HALNC
rbh
P-type conjugative transfer ATPase TrbB; K03196 type IV secretion system protein VirB11
rbh
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:ACX96450.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
|
|
SCNpilot_expt_500_bf_scaffold_339_19
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16789..17676
|
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZJ60_TERRK
Uncharacterized protein {ECO:0000313|EMBL:KGG84784.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_339_20
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18236..18664
|
Putative uncharacterized protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TJ66_ACIAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM31004.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
|
|
SCNpilot_expt_500_bf_scaffold_339_21
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18703..20604
|
Uncharacterized protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GUQ0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGG84790.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
type IV secretory pathway VirD2 pilin (relaxase)-like protein
|
|
SCNpilot_expt_500_bf_scaffold_339_22
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20627..21217
|
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q121G6_POLSJ
Uncharacterized protein {ECO:0000313|EMBL:KGG84791.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_339_23
uncultured bacterium, Bacteria
|
Not on your lists |
21383..22978
|
TraO protein n=1 Tax=uncultured bacterium RepID=Q91US1_9BACT
TraO protein {ECO:0000313|EMBL:CAC79166.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_339_24
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23029..25629
|
TRAG family protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1A2_HALNC
rbh
TRAG family protein; K03205 type IV secretion system protein VirD4
rbh
TRAG family protein {ECO:0000313|EMBL:ACX96475.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
|
|
SCNpilot_expt_500_bf_scaffold_339_25
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25642..26085
|
Single-stranded DNA-binding protein n=1 Tax=Marichromatium purpuratum 984 RepID=F9U4N5_MARPU
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=765910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Marichromatium.;" source="Marichromatium purpuratum 984.;"
single-strand binding protein; K03111 single-strand DNA-binding protein
|
|
SCNpilot_expt_500_bf_scaffold_339_26
Alcanivorax hongdengensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26152..26688
|
Conjugal transfer peptidase TraF n=1 Tax=Alcanivorax hongdengensis A-11-3 RepID=L0W8V1_9GAMM
Conjugal transfer peptidase TraF {ECO:0000313|EMBL:EKF73379.1}; TaxID=1177179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax hongdengensis A-11-3.;"
TraF protein of DNA transfer system
|
|
SCNpilot_expt_500_bf_scaffold_339_27
unknown
|
Not on your lists |
26700..27014
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_339_28
uncultured bacterium, Bacteria
|
Not on your lists |
27011..29257
|
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
DNA topoisomerase n=1 Tax=uncultured bacterium RepID=J9Z6S1_9BACT
|
|
SCNpilot_expt_500_bf_scaffold_339_29
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29258..30475
|
TraB family protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L165_HALNC
rbh
TraB family protein
rbh
Conjugal transfer protein TraB {ECO:0000313|EMBL:KDR90377.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;"
|
|
SCNpilot_expt_500_bf_scaffold_339_30
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30492..31211
|
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZMA2_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:KGG84405.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
lytic transglycosylase; K03194 type IV secretion system protein VirB1
|