ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2714_6

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: 3741..4886

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B785_PARDP similarity UNIREF
DB: UNIREF100
  • Identity: 84.8
  • Coverage: 381.0
  • Bit_score: 627
  • Evalue 1.10e-176
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein similarity KEGG
DB: KEGG
  • Identity: 84.8
  • Coverage: 381.0
  • Bit_score: 627
  • Evalue 3.30e-177
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABL71379.1}; Flags: Precursor;; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 381.0
  • Bit_score: 627
  • Evalue 1.50e-176

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Paracoccus denitrificans → Paracoccus → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1146
ATGCGGCGCATCTGGCTCTCGGGGATATTCCTGGCAGTCATTGCCGGAAGCGCCTTCCTGTTCCTTACGGGGCGTCCGCTGACGGTAACGGTCGTTGAGCCGGAGCACGACGTCGCCCTTCGCATCTATGGCCTCGGCACCGTCGAGGCGCGGATCCTCAGCCGTGTGGGCTTCGAGGTGGGCGCGGCGCTCGACTCGCTGGCCGCCGATGCCGGGGACGGCGTGGTCAAGGGGCAGGAACTGGGCGTTCTGCGCTCTGCCGAGCAGGAGGCGCGGGTGGCGCGCGCCCATGCGGCAGTGGCGGCCAATAAGGCCAATCTTGCCAAGGCCGATGCGGCGGTCGTGCGCGCCCGCGCCATGCTGGCGCAGCGCGAGGCGGCGAACCGCCGCCAGCAGGGGCTGGCGCAGCGCGATGTCACCTCGATCCAGCGCGCCGAGGAGGCGCAGCGCGACGAGGATGTGGCGCGCGCCGATCTGGCCGTGGCCGAGGCCGACCTCGCGGTAATCATGGCACAGGGATTGGATGCGACGGCCGCCTTGCAGCAGGAGGAGACCCTTCTCGCCCACCATCGTCTGGTCGCGCCCTATGATGCGCTCATTGTCGCGCGCCATGCCGAGCCGGGAACGGTGGTGAAGGCCGGCGATCCGATCTTCACCCTGATCGACCCGGCCACCGTATGGATTCAAGCCTATGTCGACGAGGAGCGCGCCGGCCGGCTCGCGCGGGGCCAGACAGGCACGATCCGGCTGCGGTCCCACCCTTCGGCCGAGTTCCATGGCGCCATCGTCCGCATCGGCATCGAAAGCGACCGGGTGAATGAGGAGCGCCGCGTCTGGCTCGCCTGCGCCGACTGTCCGCCGGAGATGTTTCTCGGCGAGCAGGCCGAGGTGCGCATCCTGACCGGCACGCGCGCGACCGCGCTGATGGTGCCCGAGGTGGCGATCGCCGGCTTTGATGGTTATCGGGGCACGGTCTGGGTCGTGCGGGACGGACGCCTCGCGCGGGCGGAGCTGACGTTCAGCGCGCGCGACGATCGCGGCCGGGTCGAGGTGGCGGACGGCTTGCCCGACGGGGCCGCAATCGTTGCCCGGCCGCCGGAGGGCGCGGCCGAGGGCAGGCGCGCCCGCGTCGGCGAGGCGCCATGA
PROTEIN sequence
Length: 382
MRRIWLSGIFLAVIAGSAFLFLTGRPLTVTVVEPEHDVALRIYGLGTVEARILSRVGFEVGAALDSLAADAGDGVVKGQELGVLRSAEQEARVARAHAAVAANKANLAKADAAVVRARAMLAQREAANRRQQGLAQRDVTSIQRAEEAQRDEDVARADLAVAEADLAVIMAQGLDATAALQQEETLLAHHRLVAPYDALIVARHAEPGTVVKAGDPIFTLIDPATVWIQAYVDEERAGRLARGQTGTIRLRSHPSAEFHGAIVRIGIESDRVNEERRVWLACADCPPEMFLGEQAEVRILTGTRATALMVPEVAIAGFDGYRGTVWVVRDGRLARAELTFSARDDRGRVEVADGLPDGAAIVARPPEGAAEGRRARVGEAP*